| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1503 |
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| Symbol | |
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| ID | 3908416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1698023 |
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| End bp | 1699300 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883398 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_485124 |
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| Protein GI | 86748628 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.839298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.265321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC TGGTGATGGG AGCCGGCGTG ATCGGCGTCA CGACGGCTTA TTATCTGGCC
AAGGCCGGCT TCGAGGTCAC CGTGATCGAC CGTCAGCCCG GCCCCGGCCT CGAGACGAGC
TTCGCCAATG CGGGCGAAGT CTCGCCCGGA TATTCTTCGC CATGGGCCGG CCCGGGCGTG
CCGCGCAAGG CGATTCAATG GATTCTCGAT CGCCACGGAC CGCTGGTGGT GCGGCCGCAG
ATCGACCCGG CGATGTGGCG CTGGGTTGTC CAGATGCTGC GCAACTGCAC CGCCAGCCGC
TACGCGCTCA ACAAGTCGCG GATGGTCGGC ATCGCCGAAT ACAGCCGGGA CTGTCTGCGC
GCTCTGCGCG CTGATATCGG CATTACCTAC GACGAGCGCA GCCAGGGCAC GCTGCAGCTG
TTTCGCAAGC AGTCGCAGCT CGATGCGATC GGCGGAGACG TCGAGATCCT GCGTCAGTAC
AATGTCCCGT TCGAAGTTTT GGATCGGGCC GGCTGCATTC GCGCGGAGCC CGGACTGGCC
GCGGTGCAGA ATTCGTTCGT CGGCGGCCTG CGACTGGTCG ATGACGAGAC CGGCGATTGT
CATCTGTTCA CGCAGCGGCT GGAGGCGGCC GCGGCCGCGC TGGGTGTGAA TTTCGTCTAC
GAAACGACGA TCCGGAGTAT CGATGCGCAG GGCGGCGCGG TCGCCGGGGT GACGACCGAC
AAGGGCAGGT TCGTCGCCGA CCGCTATGTG ATGGCGCTCG GCAGTTTTTC GCCGTTGCTG
CTGCGGCCGC TCGGCATCGA TATTCCGGTC TATCCGGTCA AGGGCTATTC GATCACCGTT
CCGATCGTCG ACGAACCGGC GTCGCCGCGA TCCACCGTAA TGGATGAGAG CTACAAGGTC
GCGATCACCC GGCTCGGCGA TCGCATCCGC GTCGGCGGGA CGGCGGAAAT CGGCGACTAC
CAGCCGCGCC TGCGGCCGAA CCGCCGAGTG ACGCTGGATC GGTCATTGAC CGATCTGTTT
CCCGGCGCAG GTGACCTGTC GCAGGCGACG TTCTGGAGCG GATTGCGGCC CATGACGCCG
GACGGGCCGC CGATCATCGG GCCGACCCGC CTCGCAAACC TGCATCTGAA CACCGGGCAT
GGCACGCTGG GCTGGACCAT GGCCTGCGGC GCGGCGCGCG TCGCGGTGGA TCAGCTTCGG
AGCGTCGAGC CCGAGATCGA CGCGCGGGCG CTGTCGCTCA GCCGCTACCA ATCGGGAGCG
GCATCACTTG GCGCATGA
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| Protein sequence | MKVLVMGAGV IGVTTAYYLA KAGFEVTVID RQPGPGLETS FANAGEVSPG YSSPWAGPGV
PRKAIQWILD RHGPLVVRPQ IDPAMWRWVV QMLRNCTASR YALNKSRMVG IAEYSRDCLR
ALRADIGITY DERSQGTLQL FRKQSQLDAI GGDVEILRQY NVPFEVLDRA GCIRAEPGLA
AVQNSFVGGL RLVDDETGDC HLFTQRLEAA AAALGVNFVY ETTIRSIDAQ GGAVAGVTTD
KGRFVADRYV MALGSFSPLL LRPLGIDIPV YPVKGYSITV PIVDEPASPR STVMDESYKV
AITRLGDRIR VGGTAEIGDY QPRLRPNRRV TLDRSLTDLF PGAGDLSQAT FWSGLRPMTP
DGPPIIGPTR LANLHLNTGH GTLGWTMACG AARVAVDQLR SVEPEIDARA LSLSRYQSGA
ASLGA
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