| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1493 |
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| Symbol | |
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| ID | 3908806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1685485 |
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| End bp | 1686978 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883388 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_485114 |
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| Protein GI | 86748618 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.40552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAG ACGAAGACCG GCTGATGTGG AAGGAACTGC TCGGCCGCAG TGCCAAAGAG
GGCGTCCAGT TGCAGGCGCA ATTGCGCAAC GCCTTCGTCG ACGCCATCGT CGATGGAAAT
CTGCCTGCGG GGCGCAGGGT GCCGTCGAGC CGCGAACTGG CGGCGCTCGC AGGCGTGTCG
CGGACGACAG CTTCGCTGGT GCTGGAGAAA CTGGCCGCGG ACAGCTTCCT GGAGGCGCGC
CCGCGAGACG GCTTCTATGT GTCGTCGGCG CTGAAGCGGC GTCAGGTCAC CTTCGGACGC
GCGGTCGGCA ACGCCGACCA GCCCGACTGG GCCGCGCGGC TGGTCCACGC CGAGGTCGGA
TATCCCTGGC AGGAGCGGCC GCGAGGCTGG GAAAGCTGCA AATATCGGTT CGTTTACGGC
GAGGTGAACG CCCAGACGTT TCCGTTCACG GACTGGCGGG ACGCCAGCCG GTCGGCGCTG
ACCAGTCCGG CCATCCAGCA TTGGGGCCAG GACAGCGGCG GCGAAGACAG CCGGCCGCTG
ATCGAGCAGA TCATCAACAA GATCCTGCCG CGACGAGGCA TCGCCGCCGC GGCGGACCAG
GTGATGCTCA CACTCGGAAC GCAACACGGG CTGTATCTGA TCGCCCAGAC CCTGCTGGGC
CCCGGTCTCA AGGTCGGGGT CGAGGAGCCC GGCTACATGG ACGCGCGCTT CATCTTTCTC
CGCAGCGGGG CGGATCTCCT CTCCATCCCG ATCGATGCAT TCGGCATGAC GATCGACAAG
CGATCGCTCG ACTGCAACTA CCTGTATTGC ACGCCGAGCC ATCAGGCGCC GACCGGCGTG
ACGATGAGCA CGGAGCGGCG TCTGTCGCTG CTCAATCAGG CGATCGTGCA AGATCAGATC
ATCATTGAGG ACGATTACGA GCCCGAACTG AAATATGACG GCGCCGCCGC GGCGGCGCTG
AAGGCGATGG ATCGGTCGGG GCGCGTGATC TATCTCAGCA GCCTGTCGAA GCTGGTCTGC
CCCGGCTTGC GGATCGGCTA TCTGGTCGGC CCAGAAACGC TGATCGCCGA ACTCAAATCG
CTGCGACGCT TGATGCTGCG GCAGTTGCCG GGCAACAATC TGGCCAGCGC CGCGCAGTTC
ATTCGGCAGG GGCACTACGA CCGCTTGATG ACCGAGATGC GGCGCTCACT CGAGACGAAG
GCCAAGCTGA TCGTCGATAC GCTGCGCAGG GAACTGCCGA TCGCTGAGTA CGAGGCGCCG
ACCGGCGGCT CCGCGATCTG GATGCGGATC CCGGGATGCC GCAGCCCGTC GAAGCTGCGC
GCCGCCTGCT TCGATGCCGG AGTTCTGATC GATCCGGTCG AGCCCTACTT TGCCCTGGCG
CCGAAGGAGA CCTGGGTGCG CCTCAACTTC GCGTCGATGC CGAGACAACT GGTGGAAGCC
GGCACGGTGG CGTTCGCCCG GACTGTGAGC AAGCTGATCC GGAGCGGCGG GTAG
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| Protein sequence | MQSDEDRLMW KELLGRSAKE GVQLQAQLRN AFVDAIVDGN LPAGRRVPSS RELAALAGVS
RTTASLVLEK LAADSFLEAR PRDGFYVSSA LKRRQVTFGR AVGNADQPDW AARLVHAEVG
YPWQERPRGW ESCKYRFVYG EVNAQTFPFT DWRDASRSAL TSPAIQHWGQ DSGGEDSRPL
IEQIINKILP RRGIAAAADQ VMLTLGTQHG LYLIAQTLLG PGLKVGVEEP GYMDARFIFL
RSGADLLSIP IDAFGMTIDK RSLDCNYLYC TPSHQAPTGV TMSTERRLSL LNQAIVQDQI
IIEDDYEPEL KYDGAAAAAL KAMDRSGRVI YLSSLSKLVC PGLRIGYLVG PETLIAELKS
LRRLMLRQLP GNNLASAAQF IRQGHYDRLM TEMRRSLETK AKLIVDTLRR ELPIAEYEAP
TGGSAIWMRI PGCRSPSKLR AACFDAGVLI DPVEPYFALA PKETWVRLNF ASMPRQLVEA
GTVAFARTVS KLIRSGG
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