| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1484 |
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| Symbol | |
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| ID | 3908797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1673415 |
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| End bp | 1674797 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883379 |
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| Product | amidase |
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| Protein accession | YP_485105 |
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| Protein GI | 86748609 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGG CCGATTTGGA CTTCAGCTTC GCCTCGATCC GCCGCGCCAT GGCCGCCGGC
GCCAAAGCTC CCGCGATCAT CGCCGAAGCC TGCCGCCGCG CGCAGGCCGC CGCCGGCGAG
GGCGTCTTCA CGCTGCTGGT CGACCCCGCG GCGGCCATCG CGCGCGCCGA GGAGTTGCAG
GCGCGCGCCG ATGCCGGCGC CGTCTTGCCG CTGCTCGGGC TGCCGTTCTC GGTCAAGGAC
AGCATCCATG TCGCCGGACT GCCGACCACC TCCAATTGCC CGGCGATGCG GCTCGAGCCG
AAAGACTCCG CGCATGCCGT GACACTGCTC GAACAGGCCG GCGCGGTGCT GATCGGCAAG
AACACGCTGG ATCAGTTCGC CACCGGGCTG AACGGCACCC GCAGCCCGGA TCCGCTGTGC
CGCAACGCCA TCGACCCGGC CTACATCCCC GGCGGCTCCA GCTCCGGCTC CGCGGTCGCG
GTGGCGCGCG ACATCGTGGC GTTCTCGCTC GGCACCGACA CCGGCGGCTC CGGCCGGGTG
CCGGCGGCCT GCAACGGCAT CGTCGGGCTG AAGCCGACCA TCGGTTTGGT GAGCTCGCGT
GGCCTCGTCT ACAACAACCG CTCGTTCGAC TGCATCCCGG TGTTCTGCAA ATTCGCCGAC
GACGCCTACG AGATCCTCGA AAACATCGCC GGCTTCGACG TGCTGGATCC GATGAGCCGA
ACCGATGCCG GCGCAATCGA GCTGCGCCCG CGTGCGCCGC AACCGCTGAC CATCGCGATT
CCGCGCGCCG ATCAGCTGAC TTTCTTCGGC GACACCGAGG CGGCCCGCGC CTACGAGGCC
GATCTGGCGG TGCTGCAAAG CCTCGGCCAC CGGCTGAAGC CGGTCGACTT CACACTGTTC
GAGACGGCGG GGCGGCTGGT GTTCCAAAGC GCGATGGTGG CGGAGCGGCT GATCGACTGC
GCCGACGTGG TGCGCGATCA TCCCGAAGCG ATTCATCCGG CAGTGTGGAG CGCATTGCAG
CCCGGCCTCA GCTACACCGC CCGCGACGCC TTCCAGGCGC TGTACGAGAT CAAACAGGCG
CAGCGCCAGG CCAGCCTGCT GCTGGCGGGT TGCGACGCCA TGGTGGTCCC GACGGTGCCG
ACGATTTTCA CCATCGCGCA GATGCTGGCC GATCCGATGG CGCTCAACAG CGCGATGGGC
ACCTACACTT ATTTCGTCAA TCCGCTCGAC ATGTGCGCGG TGGCGATCCC CGGCCGGACC
CGCTCCGACG GCCTGCGCTC GTCGCTGTGC TTCGTCGGCC GCGCCGGCGA CGACGCGTTG
CTGCGCACGC TGGCGCGCGG CTTCGAACAG GCGATGGTGC CGGCGCTGGC TGTAGCCAGC
TGA
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| Protein sequence | MTLADLDFSF ASIRRAMAAG AKAPAIIAEA CRRAQAAAGE GVFTLLVDPA AAIARAEELQ
ARADAGAVLP LLGLPFSVKD SIHVAGLPTT SNCPAMRLEP KDSAHAVTLL EQAGAVLIGK
NTLDQFATGL NGTRSPDPLC RNAIDPAYIP GGSSSGSAVA VARDIVAFSL GTDTGGSGRV
PAACNGIVGL KPTIGLVSSR GLVYNNRSFD CIPVFCKFAD DAYEILENIA GFDVLDPMSR
TDAGAIELRP RAPQPLTIAI PRADQLTFFG DTEAARAYEA DLAVLQSLGH RLKPVDFTLF
ETAGRLVFQS AMVAERLIDC ADVVRDHPEA IHPAVWSALQ PGLSYTARDA FQALYEIKQA
QRQASLLLAG CDAMVVPTVP TIFTIAQMLA DPMALNSAMG TYTYFVNPLD MCAVAIPGRT
RSDGLRSSLC FVGRAGDDAL LRTLARGFEQ AMVPALAVAS
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