| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1474 |
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| Symbol | |
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| ID | 3908787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1663203 |
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| End bp | 1664624 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883369 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_485095 |
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| Protein GI | 86748599 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0903726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGTA CTTCTGGACA TCGTCTGATT TTCGCCGCCT TCACCGCCGC GATGATGGCG
AGCACCCCGG TCGCCGCCCA GACCACCGTC ACGGTCGGCA TCGGCACCCA GGACACCACC
ACCAACACCG CGACCACCGG CGTCGTCATT CGGCAGCTGA AGCTGCTGGA GAAGTATCTT
CCCAAGGACG GCAAATACGC GAACGTCAAA TTCGAGTTCG ATTGGCAGAA TTTCACCTCC
GGCCCACCCG TCACCAACGG CATGATGGCC AACAAGCTGC AATTCGGCGG CATGGGTGAC
TATCCGCTGG TGGTGAACGG CTTCACCTTC CAGAGCAACC CCGAGAGCAA GAGCCGCCTG
ATCGCGGTCG CGGCCTACAG CCTCGACGGC TCCGGCAACG GCCTGGTGGT TCACAAGGAC
TCCCCGTACT ATCAGCTGTC CGATCTCAAG GGCAAATTGG TGAGCGTGCC GTTCGGCTCC
GCCGCGCACG GCATGATCCT AAAGGCGATG CAGGATCGCG GCTGGCCCGC GGACTATTGG
CAACTGGTGA GCCAGAGCCC GGAAGTCGGC TCGACCAATC TCCAGGAGAA GAAGATCGAC
GCCCACGCCG ATTTCGTCCC GTTCGCCGAA CTACTGCCGT TCCGCGGTTT CGCCCGCAAG
ATCTTCGACG GCGTCGAGAC CAATCTGCCG ACCTGGCACG GCGTGGTGGT GCGTACCGAC
TTCGCCGAGA AATATCCCGA AGTCGTGGTC GCCTATGTCA AGGCGATCAT CGCGGCCAAT
GCCTGGCTGC GCGCCGATCC GAAGCTCGCC GCCGAAAAGA TCCAGGAATG GACCGGCATC
AACAAGGAAG TGGTCTACAT CTTCCTGGGA CCGGGCGGCA ACATGACCAC CGATCCGACG
ATCAAGCCGC AGCTGATCGA GGCCGCCGCG GTCGACGTCA AGGTGCTGCA GAATCTCGGC
CGCATGAAGG AATTCGATCC GAAGAGCTGG GTCGACGACA GCTACATCCG CAAGGCCTAT
GCCGAACTGA AGCTCGACTA CGACGCCGAG CTGAAGAGCA CCAAGAACTA CGAAATCAGC
GGCGAGGACA AATTCTGCAA GAAGCCGATC ACCGAGCCGC GCAAGGCCGG CGAGGTCTGG
GTCGACGGCG ACGGCATCGA GCCGTTCAGC AGCGCGGCCT GCACGCTCGC CGCTTATGCG
GACATCAAGG CCAAGGGCAA GAAGATCAAC ATGGCCTATG TGTTCGACTC CGCCCGGGGC
ATCAAGCTGT TCGCCGACCA GGCCTACTAC ACGGTCGGCG CCGACAAGGC GCAGTTGTCG
CCGTTCCTGC TCAAGAAGGA CGCCGAAGCG CATGCCGCCA AGATCAACGG CAAGGTGCTG
AATTTCGACG AAGCCCTCAA GTCAGCGGTC AGCGGAGGTT GA
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| Protein sequence | MVRTSGHRLI FAAFTAAMMA STPVAAQTTV TVGIGTQDTT TNTATTGVVI RQLKLLEKYL
PKDGKYANVK FEFDWQNFTS GPPVTNGMMA NKLQFGGMGD YPLVVNGFTF QSNPESKSRL
IAVAAYSLDG SGNGLVVHKD SPYYQLSDLK GKLVSVPFGS AAHGMILKAM QDRGWPADYW
QLVSQSPEVG STNLQEKKID AHADFVPFAE LLPFRGFARK IFDGVETNLP TWHGVVVRTD
FAEKYPEVVV AYVKAIIAAN AWLRADPKLA AEKIQEWTGI NKEVVYIFLG PGGNMTTDPT
IKPQLIEAAA VDVKVLQNLG RMKEFDPKSW VDDSYIRKAY AELKLDYDAE LKSTKNYEIS
GEDKFCKKPI TEPRKAGEVW VDGDGIEPFS SAACTLAAYA DIKAKGKKIN MAYVFDSARG
IKLFADQAYY TVGADKAQLS PFLLKKDAEA HAAKINGKVL NFDEALKSAV SGG
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