Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1472 |
Symbol | |
ID | 3908785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1661402 |
End bp | 1662280 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637883367 |
Product | ABC transporter related |
Protein accession | YP_485093 |
Protein GI | 86748597 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.211771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.769555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC AAGCGCCGAA ACCGACACCG ACCAAGGGCC GCGTCGACGT CCGTAATTTC GGGCTGAGCT ATGAGACGCT CGACGGGCCG ATGGAGGCGG TGACCGACGC CTCGATCCAC GTCAATCCGG GCGAGTTCGT ATCGATCGTC GGGCCGTCCG GTTGCGGCAA ATCGACCTTG CTCAACGCCG TCGCCGGCTT TCTGAAGCCG ACCACGGGCG ACGTTCTGGT CGACGAGGTC GTGGTCGACG GCCCCAGTTC CGAGCGCGGC ATGGTGTTTC AGCAATACTC GCTGTTTCCC TGGAAGACGG TGAAGGGAAA CGTCGAGTTC GGCATGAAGA TGAAACACCT CGACAAGTCG AGCCGCGACC GCGCTGCGCG CACGCTGCTC GGGATCACCG GGCTCACCGC GTTCGAGAAC AAATATCCGG ATAGTCTGTC GGGCGGCATG AAGCAACGCG TCGGCATCGT GCGCGCGCTG GCGACCGGTC CCAAGGTGCT GCTCTGCGAC GAGCCGTTCG GCGCGCTCGA TGCGCAGACG CGGGTGATCA TGCAGCAGAT CCTCACCAAC ATGTGGCAGC GCCTGAAGAT CTCGGTGCTG TTCGTCACCC ACGACATCGA CGAGGCGATC TTTTTGTCCG ATCGCGTCTA TTGCATGACG ACGCGCCCCG GCACGATCAA GGCCGAGATC GTGATTCCGC TCGAGCGTCC ACGGCAGCAA TCGATGATGA TGTCGTCGGA ATTCCTGGCA CTCCGTCGCG GACTGATGGC GCTGATCCGC GAGGAAAGCA TCAAGGCCAT GGGAGGCGAA ATCAACGACC TCGCGCTGGA AGGCCTCAGC ATCGATATGA ACGGGCAGAG TTTCGCCGAC GTGGTGTGA
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Protein sequence | MSTQAPKPTP TKGRVDVRNF GLSYETLDGP MEAVTDASIH VNPGEFVSIV GPSGCGKSTL LNAVAGFLKP TTGDVLVDEV VVDGPSSERG MVFQQYSLFP WKTVKGNVEF GMKMKHLDKS SRDRAARTLL GITGLTAFEN KYPDSLSGGM KQRVGIVRAL ATGPKVLLCD EPFGALDAQT RVIMQQILTN MWQRLKISVL FVTHDIDEAI FLSDRVYCMT TRPGTIKAEI VIPLERPRQQ SMMMSSEFLA LRRGLMALIR EESIKAMGGE INDLALEGLS IDMNGQSFAD VV
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