| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1458 |
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| Symbol | |
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| ID | 3908408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1647986 |
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| End bp | 1648702 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883352 |
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| Product | 3-oxoacid CoA-transferase, subunit A |
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| Protein accession | YP_485079 |
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| Protein GI | 86748583 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.945444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGG TATATCCCGA CGCCCAATCG GCTCTCGCCG GAATCCTGCG GGACGGCATG
ATGATCATGT CCGGCGGTTT CGGGCTGTGC GGTATCGCCG AAACGTTGTC GGATGCGCTG
CGCGACTCCG GCGTCAAGGA CCTCACGGTG GTCTCGAACA ATGCCGGTGT CGACGGCATC
GGCCTCTCCA GGCTGCTGGA GACCCGGCAG ATCAAGAAGA TGATCTCGTC CTATGTGGGC
GAAAACAAGC TGTTCGCGCA GCAGTTCCTG GCCGGCGAGC TCGAGCTCGA ATTCGCCCCG
CAGGGCACGC TGGCCGAGCG CATCCGCGCC GGCGGCGCCG GCATCCCGGC GTTCTTCACC
AAGACCGGCG TCGGCACGCT GGTGGCCGAA GGCAAGGAAA TCCGCGAATT CGACGGCGAG
AAATACGTCA TGGAGCGCGG CCTGTTCGCC GATCTCGCCA TCGTCCACGC CTGGAAGGGC
GATACCGCCG GCAATCTCGT GTACCGCAAG ACCGCGCGCA ACTTCAATCC GATGATGGCG
ACCGCGGCCA AGATCACCAT CGCCGAGGTC GAGCATCTGG TGCCGGCCGG CGAGATCGAT
CCCGATCACA TCCACACGCC CGGCATCTTC GTCCAGCGCA TCATCGAAGT CGGCTCCGCC
AAGAAGCACA TCGAGCAGCG CACCACCCGC AAGCGCCCCG AAGCCGCGGC AACCTGA
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| Protein sequence | MNKVYPDAQS ALAGILRDGM MIMSGGFGLC GIAETLSDAL RDSGVKDLTV VSNNAGVDGI
GLSRLLETRQ IKKMISSYVG ENKLFAQQFL AGELELEFAP QGTLAERIRA GGAGIPAFFT
KTGVGTLVAE GKEIREFDGE KYVMERGLFA DLAIVHAWKG DTAGNLVYRK TARNFNPMMA
TAAKITIAEV EHLVPAGEID PDHIHTPGIF VQRIIEVGSA KKHIEQRTTR KRPEAAAT
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