| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1454 |
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| Symbol | |
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| ID | 3908404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1642658 |
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| End bp | 1643803 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883348 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_485075 |
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| Protein GI | 86748579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAG CATTGTCGCG GGCGACCGCC CAAACTGATA CCAATCCGCC GCTGTTGCGG
ATCGAGGCGG TCGCGAAGCG GTTCGGCGGC TACACCGCGG TCGATCGGCT GTCGCTGGAG
ATTGCGGCCG GCGAGTTCTT CGCGCTGCTC GGACCGAGCG GCTGCGGCAA GACCACGCTG
CTGCGCATGC TGGCGGGATT CGAGACGCCC GACAGCGGCC GCATCCTGCT CGACGGCGAG
GACATCGCCG CGGTGCTGCC GCATCGGCGG CCGGTCAACA TGATGTTCCA GAACTACGCG
TTGTTCCCGC ATCTGTCGGT GGCCGACAAC ATCGCCTTCG GTCTGAAACG CGCCGGCCTG
CCGCGAAAGG AGATCAAGGC GCGCGTCGCC GAGATGGTGG CGCTGGTGAA GCTCGATGGC
CTGGAGAAGC GCAAGCCGGA TCGGCTCTCC GGCGGTCAAC AGCAGCGCGT GGCGCTGGCG
CGCGCATTGG CGCGGCGGCC GCGGCTGTTG CTGCTCGACG AGCCGATGGC GGCGCTCGAC
AAGAAGCTGC GCGAAAGCAC CCAGCTCGAA CTGATCGCGC TGCAGAAGCG GCTCGGCACC
ACCTTCATCA TCGTCACCCA CGATCAGGAC GAGGCGATGA CGGTCGCCGA CCGGATCGGC
GTGATGCGCG CCGGCCAGCT CGAACAGGTC GCCGGCTCGC GGCAGCTCTA CGAGACCCCG
GCGTCGCGTT GGGTCGCGGA ATTCGTCGGC GACGTCAACA TGCTCGACGG CACGATCACG
TCGCGCGACC ACGGCCGCCT CACGGTCGCG GCGGGCGGCG CGGGAAACGT CACCGCCGCA
GCGCCCCGTC AGCCGGTCGA GGCGACCGCG ATCAGCCTCG CGATCCGGCC GGAGAAGATC
AAGCTGTCGC GCCGCGGGCC CGCCGCCGAC AGCGGCCATG CCGACGCGAT CAACCGGCTC
GACGGCGAGG TCGTCGAGGT CGGTTACTAT GGCGGGTTGA CCAGCTACCG GGTCAGGCTC
GACACCGGCG CCACGCTGCT GGCGAAGATG GCCAATACCA CGCGGCTCGA CGTCGACGCC
TATCGCGCCG GCGAGCACGT GGTGGCGTGG TTCTCGCCCG ACGATTGCGT GGTGCTCGAC
CGATGA
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| Protein sequence | MIEALSRATA QTDTNPPLLR IEAVAKRFGG YTAVDRLSLE IAAGEFFALL GPSGCGKTTL
LRMLAGFETP DSGRILLDGE DIAAVLPHRR PVNMMFQNYA LFPHLSVADN IAFGLKRAGL
PRKEIKARVA EMVALVKLDG LEKRKPDRLS GGQQQRVALA RALARRPRLL LLDEPMAALD
KKLRESTQLE LIALQKRLGT TFIIVTHDQD EAMTVADRIG VMRAGQLEQV AGSRQLYETP
ASRWVAEFVG DVNMLDGTIT SRDHGRLTVA AGGAGNVTAA APRQPVEATA ISLAIRPEKI
KLSRRGPAAD SGHADAINRL DGEVVEVGYY GGLTSYRVRL DTGATLLAKM ANTTRLDVDA
YRAGEHVVAW FSPDDCVVLD R
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