| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1453 |
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| Symbol | |
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| ID | 3908403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1640969 |
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| End bp | 1642444 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883347 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_485074 |
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| Protein GI | 86748578 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.469828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTCA TCGGCTTCTG CTACGCGCAA TCGCGATGGT GGCGGATCGG CCTGGCGCTG
TGCATCGTGC TGGCCGGGAT CGCCATCCGG GTCGCCCTGC ACGATTCGCT CGGCGATGGC
CTCACCTTCG TCACCCTGTA CCCCGCCGTC GCCGCCGCCG CCATGCTCGG CGGCGCTGCG
GCCGGAGTGA CCGCGACGAT CGTGGCGACG GCATCGACGC AACTCATGGT TGCTTCGCTC
GGCCGCGCTG ACAACCTGCT CGGGCTCGTC GTCTTTCTGT GCGGCTGCAT CGTCATCGTC
GCGATGGCCC AGGCGATGCG CGTGTTTCAC GCCCGCCTGA TCGAAGCCGC CGAGATCGGC
GAAAGCGAGC GGCAGCTCCG CCGCTTCGTC GAGGGGGTGC CCGCCGCGAT CGCCATGTTC
GACTGCAACA TGCGCTATCT CGCCGCCAGC ACGCGCTGGC TGTCCGCCTT CCACCCGACC
GAATCCGTCA TCGGCCGATT GCACTACGAC GTGTTTCCGA ACATTCGCGA GGAGTGGCGG
GAAGCGCATC GGCGTGGCCT CGCCGGCGAG GTGGTGCGCA ACAACGAAGA CTGCCACGAT
CGCGCCGACG GCGTGAAGCG ATGGGTCAGA TGGGAGGTGG CGCCGTGGCG CGACAGCCGC
GGCGAGATCG GGGGAATCAC CATCTATTTC GAAGACATCA CCGAGAACAG GGCGATGACG
GAGCGACTGG CGCAGGCGCA GCAGCTCGAG ACCGTCGGCC GGTTGTCCGG CGCCATCGCC
CACGACTTCA ACAACCTGCT CACCGTGATC GTCGGCAACG CCGAGCTGCT CCGCGAGCAG
CTCGAGCCGC ACGAGGATTT GAGGCAACTG GCCGAGCATA TCAGCAGCGC CGGTGACCGG
GCGGCCGAAC TGACCCAGCG TTTGCTGGCG TTCGGCCGAC GCCAGATCCT CGCCCCGGTG
GCGGTCGATC TGAACTGGCT GGTGCAGTCG GTCGCCCAGA TCGGAGCGGC TTCCGCGCGT
CGCGGCGTCA AGATCAGGAC CGTGCTGGAG CCGGCGCGGC CCCTCGTCCG CGCCGACCGG
CTGCAGCTCG AATCCGCCAT CCTCAACATC CTGATCAACG CCCAGGAAGC GGTCGCGGAC
GACAGCGGCC GGATCGCGAT CGTCACCGGC CTGGTCGTGT TCGGCGACCG GCAGGACCAG
GTCCGGCCCG GCCGCTACGG CGTGGTCGAG ATCACCGACA ACGGCGTCGG CATGAGCGAA
CGGGTCCGCG GCCAGGCGTT CGAGCCGTTC TTCACCACCA AGGAATTCGG CACCGCGAGC
GGACTGGGGT TGAGCATGGT GTATGGCTTC GTGAAACAGT CCGACGGGCA CGTCACGATC
GACAGCCAGC CCGGCGTCGG CACCACGATC CGGCTGTTTC TGCCCCTGGC GAACCCGACA
CCGTCCGACG GCGACGCGGC ACCATCGGGC GCGTGA
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| Protein sequence | MELIGFCYAQ SRWWRIGLAL CIVLAGIAIR VALHDSLGDG LTFVTLYPAV AAAAMLGGAA
AGVTATIVAT ASTQLMVASL GRADNLLGLV VFLCGCIVIV AMAQAMRVFH ARLIEAAEIG
ESERQLRRFV EGVPAAIAMF DCNMRYLAAS TRWLSAFHPT ESVIGRLHYD VFPNIREEWR
EAHRRGLAGE VVRNNEDCHD RADGVKRWVR WEVAPWRDSR GEIGGITIYF EDITENRAMT
ERLAQAQQLE TVGRLSGAIA HDFNNLLTVI VGNAELLREQ LEPHEDLRQL AEHISSAGDR
AAELTQRLLA FGRRQILAPV AVDLNWLVQS VAQIGAASAR RGVKIRTVLE PARPLVRADR
LQLESAILNI LINAQEAVAD DSGRIAIVTG LVVFGDRQDQ VRPGRYGVVE ITDNGVGMSE
RVRGQAFEPF FTTKEFGTAS GLGLSMVYGF VKQSDGHVTI DSQPGVGTTI RLFLPLANPT
PSDGDAAPSG A
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