Gene RPB_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1451 
Symbol 
ID3908401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1636951 
End bp1638093 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID637883345 
ProductFAD dependent oxidoreductase 
Protein accessionYP_485072 
Protein GI86748576 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG TTGAATGCGT CGTGGTCGGC GCCGGCGTGG TCGGGCTCGC GATCGCGCGC 
CGGCTGGCGC AAGCGGGACG CGAAGTCATC GTGCTGGAAG CCGCCGAGGG GATCGGCACC
GGCACCTCGT CGCGCAACAG CGAGGTGATC CACGCCGGGA TCTATTATCG CGCCGGCAGC
CTGATGGCGC GGCTCTGCGT CGACGGCCGG CGGGCGCTGT ATGCGTTTTG TCGAGACCAC
GGTGTGCCGC ATCGGCAATG CGGCAAGCTG ATCGTGGCGA CCACAGCGGC GGAAGCCGAG
AAGCTGGCAT CGATCCGCGC CCACGCCGCA GCCAACGGCG TCGACGATCT GCGCGCGCTC
GACGGCGCCG AAGCCCGCGC GATGGAGCCG GCGCTCACTT GCGTCGCCGC GCTGCTGTCG
CCCTCGACCG GCATCGTCGA CAGCCACGCC TACATGCTGG CGCTGTGCGG CGACGCCGAA
GCGGCCGGCG CGGCGTTCGC CTTCCACGCA CCACTGCTGC GGGCCACGGC GGAGGCCGGC
GGCTTCGCGC TCGAGGTCGG CGGCGAGGCG CCGATGACGC TCGGCTGCCG GCTGCTGATC
AATGCCGCGG GGCTCGCGGC CCCCGCGGTG GCGCGCGCGA TCACGCCGAT GCCGGCTGCG
CTGGTGCCGT CGGCGTATCT CGCCAAGGGC AATTACTTCA CCTGCAATGC GCGGGCACCG
TTCTCACACC TGATCTATCC GGTGCCCGAG CCCGGCGGGC TCGGCGTACA TCTGACGCTG
GATCTGGCGG GACAGGCCAA GTTCGGCCCG GACGTCGAAT GGATCGACAC CGTCGACTAC
GTGGTCGATC CGGCGCGGGC GGAGCGGTTC TATCCGGCGA TTCGCCGATA CTGGCCGGGC
CTTCCGGACG GGGCGCTGGC GCCGGGCTAT TCCGGGATCA GGCCGAAGAT CGTGCCGCCT
GCGGTCGCGG TGCAGGACTT CGTCATCCAG GGACCGGATG TCCACGGCGT CGCCGGGCTG
ATCAACCTGT TCGGCATCGA ATCGCCGGGA CTGACCGCGT CGCTGGCGAT CGCCGAGGAC
GTCGCCCAGT TGTCCGACAA TGTGTCGGCC GGTTTGTCGG CTGATGTGGC GGCAAGTGCG
TAG
 
Protein sequence
MEQVECVVVG AGVVGLAIAR RLAQAGREVI VLEAAEGIGT GTSSRNSEVI HAGIYYRAGS 
LMARLCVDGR RALYAFCRDH GVPHRQCGKL IVATTAAEAE KLASIRAHAA ANGVDDLRAL
DGAEARAMEP ALTCVAALLS PSTGIVDSHA YMLALCGDAE AAGAAFAFHA PLLRATAEAG
GFALEVGGEA PMTLGCRLLI NAAGLAAPAV ARAITPMPAA LVPSAYLAKG NYFTCNARAP
FSHLIYPVPE PGGLGVHLTL DLAGQAKFGP DVEWIDTVDY VVDPARAERF YPAIRRYWPG
LPDGALAPGY SGIRPKIVPP AVAVQDFVIQ GPDVHGVAGL INLFGIESPG LTASLAIAED
VAQLSDNVSA GLSADVAASA