| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1431 |
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| Symbol | |
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| ID | 3908381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1620771 |
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| End bp | 1622603 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883325 |
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| Product | peptidase M3B, oligoendopeptidase-like clade 3 |
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| Protein accession | YP_485052 |
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| Protein GI | 86748556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.838587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCA AGTCGGCGAA GCCCGCGAAA AAGCAGGCGG CCGCGGCGGG CCGGAAGCCG
GTCAAGCTGC CGGAATGGAA TCTGGCCGAT CTGTATTCGG CGATCGATGC GCCGCAGGTC
GCCGCCGATC TCGACCGGCT CGACGCCGAA TGCGCCGCGT TCGAGGCCGA GTTCAAGGGC
AAGCTGGCGG AGCAGGCAGC CGCCGACGGC GGCGGCGCAT GGTTGGCCGG CGCGGTGAAG
CGCTACGAGG CGATCGAGGA TCTGGCCGGT CGGCTCGGCT CCTATGCGGG CCTCGTCCAC
GCCGGCGACA GCGTCGACCC GGTGAAGTCG AAATTCTACG GCGACGTTTC CGAGCGGCTG
ACCGCGGCGT CGGTGCATCT GTTGTTCTTC TCGCTGGAAC TCAATCGCGT CGACGACGCG
GTGCTGGAGC GGGCCATGCA GGCACCCGAA CTCGGTCACT ACCGGCCGTG GATCGAGGAT
CTGCGCAAGG ACAAGCCGTA TCAGCTCGAC GACCGTGTCG AGCAGCTGTT CCACGAAAAG
TCGCAGACCG GCTACGGCGC CTTCAATCGG CTGTTCGACC AGACCATCTC CGGCCTGCGC
TTCAAGCTCG GCGGCAAGGA ACTGGCGATC GAGCCGACGC TGAATCTGCT GCAGGACCGT
ACACCGGCCA AGCGCAAGGC GGCGGCCGAG GCGCTGGCCA AGACCTTCAA GGCCAACGAG
CGCACCTTCG CGCTGATCAC CAATACGCTG GCCAAGGACA AGGAGATTTC CGACCGCTGG
CGCGGCTTCG AGGACGTCGC GGATTCGCGG CATCTCGCCA ACCGTGTCGA GCGCGAGGTG
GTCGATGCGC TGGTCGCCTC GGTGCGCGCC GCCTATCCGC GGCTGTCGCA TCGCTACTAC
AAGCTCAAGG CCGGCTGGTT CGGCAAGAAG AAGCTGCCGC ATTGGGACCG CAACGCGCCG
CTGCCGTTCG CGGCCACCGG CAGCATCGCG TGGCCGGAAG CGCGCGAGAT GGTGCTGACC
GCCTACAGCG CGTTCTCGCC GGAAATGGCG CGGATCGCCG AGCGGTTCTT CACCGATCGC
TGGATCGATG CGCCGGTGCG TCCGGGCAAG GCGCCGGGCG CGTTCTCGCA CCCGACCACG
CCGTCGGCGC ATCCTTATGT GCTGATGAAC TACCAGGGCA AGCCGCGCGA CGTGATGACG
CTCGCCCATG AACTCGGCCA CGGCGTGCAC CAGGTGCTCG CCGCCGGCAA CGGCGCGCTG
ATGGCGCCGA CGCCGCTGAC GCTGGCCGAG ACCGCCAGCG TGTTCGGCGA GATGCTGACC
TTCCGCCGGC TGCTGTCGCA GACCAAGAGC GCCAAGCAGC GCCAGGCGTT GCTCGCCGGC
AAGGTCGAGG ACATGATCAA CACCGTGGTG CGGCAGATCG CGTTCTACTC GTTCGAGCGC
GCGATCCACA CCGAGCGCCG CAGCGGCGAA CTCACCGCGC AGCGGATCGG CGAGATCTGG
CTCGGCGTGC AGAGCGAGAG CCTGGGGCCG GCGATCGAGA TCAAGCCGGG CTACGAGAGC
TTCTGGATGT ACATCCCGCA CTTCATCCAT TCGCCGTTCT ACGTCTACGC CTACGCGTTC
GGCGACTGCC TGGTGAACTC GCTTTACGCG GTCTACGAGC ACGCCCAGGA GGGCTTCGCC
GAGCGCTACC TCGCGATGCT CTCGGCCGGC GGCACCAAGC ACTATTCCGA ACTGCTGGCC
CCGTTCGGCC TCGACGCCAA GGACCCCAGC TTCTGGGACG GCGGCCTGTC GGTGATCGCC
GGCATGATCG ACGAACTGGA GGCGATGGGC TAG
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| Protein sequence | MASKSAKPAK KQAAAAGRKP VKLPEWNLAD LYSAIDAPQV AADLDRLDAE CAAFEAEFKG
KLAEQAAADG GGAWLAGAVK RYEAIEDLAG RLGSYAGLVH AGDSVDPVKS KFYGDVSERL
TAASVHLLFF SLELNRVDDA VLERAMQAPE LGHYRPWIED LRKDKPYQLD DRVEQLFHEK
SQTGYGAFNR LFDQTISGLR FKLGGKELAI EPTLNLLQDR TPAKRKAAAE ALAKTFKANE
RTFALITNTL AKDKEISDRW RGFEDVADSR HLANRVEREV VDALVASVRA AYPRLSHRYY
KLKAGWFGKK KLPHWDRNAP LPFAATGSIA WPEAREMVLT AYSAFSPEMA RIAERFFTDR
WIDAPVRPGK APGAFSHPTT PSAHPYVLMN YQGKPRDVMT LAHELGHGVH QVLAAGNGAL
MAPTPLTLAE TASVFGEMLT FRRLLSQTKS AKQRQALLAG KVEDMINTVV RQIAFYSFER
AIHTERRSGE LTAQRIGEIW LGVQSESLGP AIEIKPGYES FWMYIPHFIH SPFYVYAYAF
GDCLVNSLYA VYEHAQEGFA ERYLAMLSAG GTKHYSELLA PFGLDAKDPS FWDGGLSVIA
GMIDELEAMG
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