| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1403 |
|---|
| Symbol | |
|---|
| ID | 3908353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1594676 |
|---|
| End bp | 1595611 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637883297 |
|---|
| Product | glutaminase |
|---|
| Protein accession | YP_485024 |
|---|
| Protein GI | 86748528 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2066] Glutaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.208624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTG ACCTGCTCGA CCACACCGTC GCCGAGATCG CCGCAGAGAT GGCGCAGCGG
CCCGACCGCG GCGCGGTCGC GAGCTACATC CCCGAACTGG CTGGCGTCGA TCCGCAGCGC
TTCGGCCTCG TCGTGATCGA CGCCGACGGC CATGTCGCGG CCGGTGGCGA TGCCGATATG
CCGTTCTCGA TCCAGAGCAT CTCCAAGGTG TTCACGCTGA CGCTGGCGCT CGGCCTGGCC
GGCGACCGGG TGTGGCGCCG GGTCGGCCGC GAGCCGTCGG GCTCGGCCTT CAATTCCATC
GTTCAACTCG AGCGCGAGCG CGGCATCCCG CGCAATCCCT TCATCAACGC CGGCGCGATC
GCGGTCACCG ACCTGATCCT GTCGGGCCAC CAGCCGCGCG AGGCGCTCGG CGAGATTCTG
CGCTTCATGC AGTTCCTGGC CGGCGACGAC AGCATCGTGA TCGACGACGC CGTGGCCGCC
TCGGAGCAGC GCACCGGCTT CCGCAACGCG GCGCTGGCGA ACTACATGAA GTCCTTCGGC
GTGCTCGACA ATCCGGTCGA GTACACGCTC GGCGTCTATT TCCATCATTG CGCGATTGCG
ATGAGCTGCC GCCAGTTGGC GCTGGCGGGG CGCTTTCTCG CCCACAACGG CCGCAATCCG
TCGACCGGCC ACAACGTGGT GTCGACCCAG CGGGCGCGAC GCATCAATGC GCTGATGCTG
ACTTGCGGGC ACTATGACGG CTCGGGCGAA TTCGCCTATC GGGTGGGGCT ACCCGGCAAA
AGTGGAGTCG GGGGAGGGGT GCTGGCGGTC GCGCCCGGCA AGGCCTCGAT CGCGGTGTGG
TCGCCGGGGC TCGATGCGGC GGGCAATTCG CATCTCGGCC GGATCGCGCT CGAGGCGCTG
ACCAGGCGGC TGGGCTGGTC GATCTTCGGG GTTTGA
|
|---|
| Protein sequence | MNPDLLDHTV AEIAAEMAQR PDRGAVASYI PELAGVDPQR FGLVVIDADG HVAAGGDADM
PFSIQSISKV FTLTLALGLA GDRVWRRVGR EPSGSAFNSI VQLERERGIP RNPFINAGAI
AVTDLILSGH QPREALGEIL RFMQFLAGDD SIVIDDAVAA SEQRTGFRNA ALANYMKSFG
VLDNPVEYTL GVYFHHCAIA MSCRQLALAG RFLAHNGRNP STGHNVVSTQ RARRINALML
TCGHYDGSGE FAYRVGLPGK SGVGGGVLAV APGKASIAVW SPGLDAAGNS HLGRIALEAL
TRRLGWSIFG V
|
|---|
| |