| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1399 |
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| Symbol | |
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| ID | 3908349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1590401 |
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| End bp | 1591837 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883293 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_485020 |
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| Protein GI | 86748524 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.277846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTC TTCCGGTCTT TCTCGATCTC GCGGCAGGGC CGGTTGTGCT GGTGGGCGCC
GGCGAGATGG CGCGTGCCAA GCTGCGGCTG CTGCTGTCGG CGGGCGCCGC GATCCGCTGG
CATGTCACCG ACGGCGACAA TGATCTCGCC GGTATCAGCG AGGCCGACCG CGCGCGCATC
ACGTTGGCGA CGGGGGAACC CGCCGAGGCC GATCTGTCCG GCGCGATCGC GCTGATGTGC
GCCGGCGCCG GCGATCTCGC GGCCCTGCTG GCGGCGAGGG CCCGTGCGCT CGGCGTGCCG
GTCAATGTGA TGGATGAGCT GTCGCACTCC ACGTTCATCT TTCCGGCGAT CGTCGATCGC
GGCGATGTGG TGGTCGCGAT CGGCACCGGC GGCTCGTCGC CTGTCGTCGC GCGCCGCGTG
CGCGAGATGA TCGAGACATT GCTGCCGGCG CGGATCGGCG ATCTCGCCGC GCTGATCGGG
CGTTGGCGCA AACCGATCAA GGCGCGGATT GCGGAATTTC CGCTGCGCCG CCGGTTCTGG
GAGCGCGTCG TCGACGGCCC GATCGGCAAG GCGGTGCTCG AAGGGCGCGG CGCCGAGGCC
GAGGATCTGC TCGAGGCAAT CACCGATCCC TCGGCCTATG CACGCGATTC TGTTTCAGCG
CATACCGAAG GCCACGTCAC CCTGGTCGGC GCCGGCCCCG GCGATCCTGA TCTCTTGACC
ATCAAGGCGC TGCGCGCGCT GCAGGACGCC GACGTGGTGT TCTACGACGA ACTGGTGTCG
CCCGAAATTC TCGACCGGAT CCGCCGCGAT GCCGCCCGCG TGCCGGTCGG CCGCCGCATC
GGCAAGCCCG GGATCGGCCA GGAGGCGATC AACGCGCTGC TGATCGAAGC GGCGCAAGCC
GGCCAGCGCG CGGTGCGGCT GAAGGGCGGC GATCCGTTCG TGTTCGGCCG CGGCGGTGAA
GAAATCGAGG CGTTGCGCGA CGCCGGCGTG TCCTATGCGG TGGTGCCGGG CATCAGCGCG
GGCTTCGGTG CGGCGGCGCA ATTCGAGGTG CCGCTGACCT ATCGCCACGA GGCGCTGCGC
ATCACATTCC TCACCGCGCA CAAGGCCAAG GATGCCGAGG CCGTCGACTG GACGGCGCTC
ACCGACCAGA AGATGACGGT GGTGGTGTAC ATGGGCATGG CCGCGGCGCC GACGGTGCGC
GCGGGCCTGC TGACGGCCGG CCGTTCGCCG CAGACGCCGG TCGGCGTGTT CGCCCGGGTA
ACGCGGCCGG ACGCCAAGGC CGCGGTGGGC ACGCTCGACG ATCTGCCGGC ACTGGTCGAG
CAGGTCGAGG TCGGTCCGGC GATCCTGGTG ATCGGCGATG TCGTCGCGCA TTCGGCACCG
TGGCGCCGGC AACAACTCCA GCAACTCGTG TCGACCTATC AGGTAGCCGC CGAATGA
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| Protein sequence | MRFLPVFLDL AAGPVVLVGA GEMARAKLRL LLSAGAAIRW HVTDGDNDLA GISEADRARI
TLATGEPAEA DLSGAIALMC AGAGDLAALL AARARALGVP VNVMDELSHS TFIFPAIVDR
GDVVVAIGTG GSSPVVARRV REMIETLLPA RIGDLAALIG RWRKPIKARI AEFPLRRRFW
ERVVDGPIGK AVLEGRGAEA EDLLEAITDP SAYARDSVSA HTEGHVTLVG AGPGDPDLLT
IKALRALQDA DVVFYDELVS PEILDRIRRD AARVPVGRRI GKPGIGQEAI NALLIEAAQA
GQRAVRLKGG DPFVFGRGGE EIEALRDAGV SYAVVPGISA GFGAAAQFEV PLTYRHEALR
ITFLTAHKAK DAEAVDWTAL TDQKMTVVVY MGMAAAPTVR AGLLTAGRSP QTPVGVFARV
TRPDAKAAVG TLDDLPALVE QVEVGPAILV IGDVVAHSAP WRRQQLQQLV STYQVAAE
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