| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1386 |
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| Symbol | |
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| ID | 3908491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1578460 |
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| End bp | 1579005 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883280 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_485007 |
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| Protein GI | 86748511 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTCTCA CCGATTCTCT TCGAGACGAC ATTCTGGCGG CAGTGCCGAG CTTGCGTGCG
TTCGCGATTT CGCTCAGCGG AAACGGTGAT CGCGCGGACG ATCTCGTGCA GGAAACCCTG
CTTCGCGCGC TGGCCAATAT CGACTCATTC CAGCCGGGCT CGAATTTGCC GGCCTGGCTG
TTCACGATTC TGCGCAATCT GTTCCGGTCC GACTATCGGA AGCGGCGGCG CGAGGTCGAG
GACGCTGATG GCAGTTATGC CAAGACGCTG AAATCGCAGC CGGGCCAGAA CGCGCATCTG
GAGTTCGAAG AATTTCGAGC GGCGCTGGAA AAGCTTCCGC AGGATCAGCG CGAAGCGTTG
ATCCTGGTCG GTGCCTCGGG CTTCTCCTAT GAAGACGCCG CCGCCATCTG CGGCTGCGCC
GTGGGCACCA TCAAGAGCCG CGTCAACCGC GCGCGGTCCA AGCTGAGTGC GTTGCTCTAT
GTCGACGGCG CCGAGGATTT CGGACCCGAC GACACAGTGC GCGCCGTGAT CGGCAGCAAC
GGCTGA
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| Protein sequence | MPLTDSLRDD ILAAVPSLRA FAISLSGNGD RADDLVQETL LRALANIDSF QPGSNLPAWL
FTILRNLFRS DYRKRRREVE DADGSYAKTL KSQPGQNAHL EFEEFRAALE KLPQDQREAL
ILVGASGFSY EDAAAICGCA VGTIKSRVNR ARSKLSALLY VDGAEDFGPD DTVRAVIGSN
G
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