Gene RPB_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1371 
Symbol 
ID3908476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1562644 
End bp1565367 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content67% 
IMG OID637883265 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_484992 
Protein GI86748496 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.870954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTT ATCGATTGAG CAATCTCCTG GCACCTGCCG CGGTGGCGGT GATCGGTGCC 
AGCCCGCGGC CGGCATCGCT CGGACGGGCG GTGCTCGACA ATCTGCGCAG CGCCGGCTTC
AAGGGCGAAA TCGGCGTCGT CAATCCGCGC TATCCCGAGA TCGGCGGCTT CAAGACCGTC
CGCTCGCTCG GTGAGTTGGC GTTCGTACCC GACCTCATCG TCATCACCGC GCCGTCGCGA
ACGGTCGCGA AGATCATTAC CGAAGCCGGC GAGCGCGGCG TCGCCGGGGC GATCATCATC
AGCGCCGAGA TGGGCCGCGG CCAGGGATCG TATGCCGACG CCGCCAATCG CGCCGCGCGC
AAATCGGGGA TTCGGCTGAT CGGCCCGAAC TGCCTCGGCA TCATGGTGCC GGGTTCCAAT
CTCAACGCCA GCTTCGCGGC GCATATGCCA CGTCGAGGCC ATCTGGCGCT GATCTCGCAG
TCCGGCGCCA TCGCGGCCGG CATGGTCGAC TGGGCCGCCG TCAAGAACAT CGGATTTTCC
GGGATCGTGT CGATCGGAGA TCAGCTCGAC GTCGACATCG CCGACATGCT GGACTACTAC
GCCGGCGATA TCGAGACCCG CGCCATCCTG CTCTACATCG AAGCGGTGAC CGACGCCCGC
AAGTTCATGT CTGCGGCGCG CGCAGCGGCA CGCGTGAAGC CGGTGGTGGT GGTGAAGTCG
GGGCGCATGG CGCATGGCGC CTTGGCGGCC GCGACCCACA CCGGCGCACT GGCCGGCGCC
GATGCCGTGT ACGGCGCCGC GTTCCGTCGT GCCGGCATGC TGCGAGTGTT CGACCTGCGC
GAATTGTTCG ATTGCGCCGA AACGCTCGGG CGCGTCAGCG CGCCGCGCGG CAAACGGGTT
GCGATCCTCA CCAATGGCGG CGGCATCGGC GTGCTGGCGG TCGATCGGCT GGCCGAACTC
GGCGGCATCC CGGCGACGCT GTCGAAGGCC GTGTGCGACA AGCTCGATGC CGTGCTGCCG
CCGACCTGGT CGGGTTCGAA CCCGATCGAC ATCACCGGCG ACGCCGACGC GGAGCGGTAC
GCCGTGGCGC TGTCGATCCT GCTGGCCGAC CCCGAGAACG ATGCGATCCT GGTGATGAAT
GTGCAAACCG CGATGGCGTC GTCCGCGGAG ATCGCCAAGG CGGTGATCCG GGTGGTCGGC
GAGGAGCGCG TTCGCCGCAG TTTCTTCAAG CCGGTATTTG CGGTCTGGGT CGGCGCCGAC
GACGCGGTGA CGAAGGCGTT CGACGCCGCC TCGATTCCCA ACTATCCGAC CGAGGACGAC
GCGGTTCGCA GCATCATCAA TCTGGTGCGC TATCGCGAGG CCGCGCAACT CTTGACGGAG
GTGCCGCCGA GCCTGCCCAA GGAGTTCGAT CCGGACACCG AAGCGGCGCG TGCGGTGGTC
GAGAAGGCGC TGGCCGAGGG TCGCTCCTGG CTCGATCCGA TCGAGGTCGG CGCGCTGTTC
GCCGCCTATC AGATCCCGAT GGTGCCGACG CTGGCCGCGG TCGATGCCGA TGCCGCGGTG
GCGTGGGCGG AGCCGTTCCT GGCGCAGGGC GTCACCGTGG TGGTCAAGGT GATGTCGCGC
GACATCACCC ACAAATCCGA CGTCGGCGGC GTGGTGCTCA ACCTCACCAG CGCCGAAGCG
GTCCGCACGG CCGTCGGCGA GATTCTCGCC CGTGCCGCGA AGTTGCGGCC GAAGGCGCGG
CTCGACGGCG TGATGGTGCA GCCGATGATT ATGCGCCGCA AGGCGCGTGA ATTGACCGTC
GGCATCGCCG ACGATCCGAC CTTCGGGCCG GTGATCGTCT TCGGCCACGG CGGCACCGGC
GTCGAGATCA TCGACGACCG CGCGCTGGCG CTGCCGCCGC TCGATCTGCC GCTCGCCTGT
TCGCTGATCG CGCGCACGAG GGTCTCGAAG CTGTTGCAGG CCTATCGCGA TGTCCCGGCG
GTGAAGGACG GCGCGGTGGC GCTGACGCTG GTCAAGCTGT CGCAGATGGC GGCGGACCTG
CCGGAGATCC ACGAGCTCGA CATCAATCCG CTACTGGCCG ACGAGAATGG CGTGGTGGTG
ATCGACGCGC GCGTCGTTGT GCGCAAGGCG ATGCGCAAAT TCGCGGGTCT CGGCAACGCC
ACCTTCGCGG TGAAGCCGTA TCCGTCCGAG TGGGAGCGCC ATTTGGTCGT AAAGGACGGC
TGGCGCGTGC TGGCCCGGCC GCTTCGGCCC GACGACGAGC CGGCGATTCA TGAGTTTCTC
ACCCACGTCA CGTCCGAAGA TCTGCGGCTG CGGTTCTTTG CGGCGATGAA GGAGTTCAGC
CACGCCTTCA TCGCGCGGCT GACGCAGATC GACTACGCCC GGGCGATGGC CTTCATCGCG
CTCGACGAGG CGACCGGCGA AACCCTCGGC GTGGTGCGGA TTCACTCGGA CTCGATCTAC
GAGAGCGGCG AATACGCCAT CCTGTTGCGC TCCGACCTGA AAGGCAAGGG CCTCGGCTGG
GCGTTGATGA AGTTGATCAT CGAGTATGCA CGCGCCGAAG GGCTGAAATT CGTCTGCGGT
CAGGTGCTGC GGGAGAACAC CGCGATGCTG CGGATGTGCC GCCAGCTCGG CTTCGAGGCC
AAGACCGATC ACTCCGAGCC CGACATCCTC AACGTGACGC TGCCGCTGAG CGACGAGTCC
GCCCGCGCCG CTGCGAAGGC GTGA
 
Protein sequence
MSTYRLSNLL APAAVAVIGA SPRPASLGRA VLDNLRSAGF KGEIGVVNPR YPEIGGFKTV 
RSLGELAFVP DLIVITAPSR TVAKIITEAG ERGVAGAIII SAEMGRGQGS YADAANRAAR
KSGIRLIGPN CLGIMVPGSN LNASFAAHMP RRGHLALISQ SGAIAAGMVD WAAVKNIGFS
GIVSIGDQLD VDIADMLDYY AGDIETRAIL LYIEAVTDAR KFMSAARAAA RVKPVVVVKS
GRMAHGALAA ATHTGALAGA DAVYGAAFRR AGMLRVFDLR ELFDCAETLG RVSAPRGKRV
AILTNGGGIG VLAVDRLAEL GGIPATLSKA VCDKLDAVLP PTWSGSNPID ITGDADAERY
AVALSILLAD PENDAILVMN VQTAMASSAE IAKAVIRVVG EERVRRSFFK PVFAVWVGAD
DAVTKAFDAA SIPNYPTEDD AVRSIINLVR YREAAQLLTE VPPSLPKEFD PDTEAARAVV
EKALAEGRSW LDPIEVGALF AAYQIPMVPT LAAVDADAAV AWAEPFLAQG VTVVVKVMSR
DITHKSDVGG VVLNLTSAEA VRTAVGEILA RAAKLRPKAR LDGVMVQPMI MRRKARELTV
GIADDPTFGP VIVFGHGGTG VEIIDDRALA LPPLDLPLAC SLIARTRVSK LLQAYRDVPA
VKDGAVALTL VKLSQMAADL PEIHELDINP LLADENGVVV IDARVVVRKA MRKFAGLGNA
TFAVKPYPSE WERHLVVKDG WRVLARPLRP DDEPAIHEFL THVTSEDLRL RFFAAMKEFS
HAFIARLTQI DYARAMAFIA LDEATGETLG VVRIHSDSIY ESGEYAILLR SDLKGKGLGW
ALMKLIIEYA RAEGLKFVCG QVLRENTAML RMCRQLGFEA KTDHSEPDIL NVTLPLSDES
ARAAAKA