Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1354 |
Symbol | |
ID | 3908459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1543946 |
End bp | 1544461 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883248 |
Product | NADH dehydrogenase subunit I |
Protein accession | YP_484975 |
Protein GI | 86748479 |
COG category | [C] Energy production and conversion |
COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.253044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.161644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCT GGCTGGAAGC GATGTTGCGG GTCGGCCGCA AGCTGTTCGT CAAGGCGGAG ACGCAGCTTT ATCCGGAAGA GAAGCCGAAG CTGTTTCCGC GCAGCCGCGG CCGCATCGTG CTGACGCGCG ATCCGGACGG CCAGGAGCGC TGCGTCGCCT GCAACCTGTG CGCGGCGGTG TGCCCGGTCG GCTGCATCGA TCTTTCCAAG GCGGTCGCCG ACGACGGCCG CTGGTATCCG GAGCATTTCC GCATCAATTT CGCGCGCTGC ATCTTCTGCG GCTTCTGCGA GGAGGCGTGT CCGACCGCGG CGATCCAGCT CACGCCGGAT TTCGAACTCG GCGAATGGCG CCGCGACGCG CTGGTCTACG AGAAGCACGA TCTGCTGATT GCAGGCGAGG GCAAGGTGCG CGGCTATCGC TACTGGTCGG TCGCCGGCAA GGCGATCGAC GGCAAGGACA AGGGCTGCGC CGAGAACGAA TCCCCGCCGG TCGATCTGAA GGGGCTGCTG CCATGA
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Protein sequence | MIGWLEAMLR VGRKLFVKAE TQLYPEEKPK LFPRSRGRIV LTRDPDGQER CVACNLCAAV CPVGCIDLSK AVADDGRWYP EHFRINFARC IFCGFCEEAC PTAAIQLTPD FELGEWRRDA LVYEKHDLLI AGEGKVRGYR YWSVAGKAID GKDKGCAENE SPPVDLKGLL P
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