Gene RPB_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1354 
Symbol 
ID3908459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1543946 
End bp1544461 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID637883248 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_484975 
Protein GI86748479 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.253044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.161644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCT GGCTGGAAGC GATGTTGCGG GTCGGCCGCA AGCTGTTCGT CAAGGCGGAG 
ACGCAGCTTT ATCCGGAAGA GAAGCCGAAG CTGTTTCCGC GCAGCCGCGG CCGCATCGTG
CTGACGCGCG ATCCGGACGG CCAGGAGCGC TGCGTCGCCT GCAACCTGTG CGCGGCGGTG
TGCCCGGTCG GCTGCATCGA TCTTTCCAAG GCGGTCGCCG ACGACGGCCG CTGGTATCCG
GAGCATTTCC GCATCAATTT CGCGCGCTGC ATCTTCTGCG GCTTCTGCGA GGAGGCGTGT
CCGACCGCGG CGATCCAGCT CACGCCGGAT TTCGAACTCG GCGAATGGCG CCGCGACGCG
CTGGTCTACG AGAAGCACGA TCTGCTGATT GCAGGCGAGG GCAAGGTGCG CGGCTATCGC
TACTGGTCGG TCGCCGGCAA GGCGATCGAC GGCAAGGACA AGGGCTGCGC CGAGAACGAA
TCCCCGCCGG TCGATCTGAA GGGGCTGCTG CCATGA
 
Protein sequence
MIGWLEAMLR VGRKLFVKAE TQLYPEEKPK LFPRSRGRIV LTRDPDGQER CVACNLCAAV 
CPVGCIDLSK AVADDGRWYP EHFRINFARC IFCGFCEEAC PTAAIQLTPD FELGEWRRDA
LVYEKHDLLI AGEGKVRGYR YWSVAGKAID GKDKGCAENE SPPVDLKGLL P