Gene RPB_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1329 
Symbol 
ID3907837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1515530 
End bp1516354 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID637883223 
Productaldo/keto reductase 
Protein accessionYP_484950 
Protein GI86748454 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.245506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.195487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAC TGACCACGCA GGGCCTGAAT GTGCCCCGAC TCGGACTGGG CACCTTCAAG 
CTGCAGGGCA AGGATTGCCA CGAAGCGGTG CTGAGCGCGC TGGCGATGGG CTATCGCCAT
ATCGACACCG CCGAGATGTA CGCCAACGAG GATGCGGTCG GCGACGCGCT CGAGGACACC
GCGGTGCCGC GCGAGCAGAT CCACCTCACC ACCAAAGTGT GGTGGACCAA TCTCGCCCCC
GACGCGATCC GCAAGGCGTT CGACCAGAGC TTGGCCAAGC TGAAGACCGA CTATGTCGAC
TTCTATCTGA TCCATTGGCC GGCGCCCGAC ATGAATCTCG CAAGCGCGCT GGAGACGCTG
ATGCGGATCA GGGACGACGG CGGCGCCCGC GCCATCGGCG TCTGCAATTT TCCAATCGCG
CTGCTGAAAC AGGCGATCGA GGACATCAAT GCGCCGATCG CCTGCAACCA GGTCGAGTAT
CACGCGCTGC TCGGCCAATC GAAGCTGCTG CCCTATATGC AGAGCAAGGG CATGCCGCTG
ACCGCCTATG CGCCGCTGGC GCAGGGCCGG CTCGCCTCGT TTCCGGAGTT GAAGGCGATC
GCCGACAAGC ACGACGCCAC CGCGGCGCAG ATCGCGCTGG CCTGGCTGCT CGAGCAGGAC
GGCGTGATGG CGATCCCGAA GGCGCGCAGC GAGGCCAGCC AGAAGAGCAA TCTCGGCGCG
CTCGACATCA AACTCGACCA GGACGATCGC GCGCTGATCG CCAAGCTGCC GAAGAACCAG
CGCTTCGTCA CGCCGGCGTT CTCGCCGGAA TGGGACGAGG AGTAG
 
Protein sequence
MESLTTQGLN VPRLGLGTFK LQGKDCHEAV LSALAMGYRH IDTAEMYANE DAVGDALEDT 
AVPREQIHLT TKVWWTNLAP DAIRKAFDQS LAKLKTDYVD FYLIHWPAPD MNLASALETL
MRIRDDGGAR AIGVCNFPIA LLKQAIEDIN APIACNQVEY HALLGQSKLL PYMQSKGMPL
TAYAPLAQGR LASFPELKAI ADKHDATAAQ IALAWLLEQD GVMAIPKARS EASQKSNLGA
LDIKLDQDDR ALIAKLPKNQ RFVTPAFSPE WDEE