Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1328 |
Symbol | |
ID | 3907836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1514707 |
End bp | 1515183 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637883222 |
Product | hypothetical protein |
Protein accession | YP_484949 |
Protein GI | 86748453 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00011] ybaK/ebsC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0917031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.183333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAT CCACCCGCGC GACGCAGACG CTCGACAAGC TCGGCGTCGC CTACACGCTG CACAGCTACG ACTACGACCC CGACGCTGAG TCGATCGGGC TCGCGGCCGC CGCCGCGCTC GGCGTTCCGC CGCGGCGGAT GCTGAAATCG CTGATGGCCG AGCTCGACGG CAAGCCGGTC TGCGCGGTGA TCGCCTCCGA TCGCGAGGTC AGCATGAAGA AACTCGCGAC CGCGCTCGGC GGCAAGAGCG CCAGGATGAT GAAGCCGGCC GACGCCGAGC GGCTGACCGG CTATCATGTC GGCGGCATCT CGCCGTTCGG CCAGAAGAAG CGCGTGCCGG TGGCGATCGA CGAGGCGGCG CTCAGCGAAG CGACCGTCTA TCTCAACGGC GGCCAGCGCG GGCTGCAAAT CGAGATCGAT CCGCGCGCAG CGGTGACCGC GCTCGGCGCG GTGACGAAGC CGATCGCGGC GGATTGA
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Protein sequence | MSKSTRATQT LDKLGVAYTL HSYDYDPDAE SIGLAAAAAL GVPPRRMLKS LMAELDGKPV CAVIASDREV SMKKLATALG GKSARMMKPA DAERLTGYHV GGISPFGQKK RVPVAIDEAA LSEATVYLNG GQRGLQIEID PRAAVTALGA VTKPIAAD
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