Gene RPB_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1328 
Symbol 
ID3907836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1514707 
End bp1515183 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID637883222 
Producthypothetical protein 
Protein accessionYP_484949 
Protein GI86748453 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0917031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.183333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAT CCACCCGCGC GACGCAGACG CTCGACAAGC TCGGCGTCGC CTACACGCTG 
CACAGCTACG ACTACGACCC CGACGCTGAG TCGATCGGGC TCGCGGCCGC CGCCGCGCTC
GGCGTTCCGC CGCGGCGGAT GCTGAAATCG CTGATGGCCG AGCTCGACGG CAAGCCGGTC
TGCGCGGTGA TCGCCTCCGA TCGCGAGGTC AGCATGAAGA AACTCGCGAC CGCGCTCGGC
GGCAAGAGCG CCAGGATGAT GAAGCCGGCC GACGCCGAGC GGCTGACCGG CTATCATGTC
GGCGGCATCT CGCCGTTCGG CCAGAAGAAG CGCGTGCCGG TGGCGATCGA CGAGGCGGCG
CTCAGCGAAG CGACCGTCTA TCTCAACGGC GGCCAGCGCG GGCTGCAAAT CGAGATCGAT
CCGCGCGCAG CGGTGACCGC GCTCGGCGCG GTGACGAAGC CGATCGCGGC GGATTGA
 
Protein sequence
MSKSTRATQT LDKLGVAYTL HSYDYDPDAE SIGLAAAAAL GVPPRRMLKS LMAELDGKPV 
CAVIASDREV SMKKLATALG GKSARMMKPA DAERLTGYHV GGISPFGQKK RVPVAIDEAA
LSEATVYLNG GQRGLQIEID PRAAVTALGA VTKPIAAD