| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1305 |
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| Symbol | |
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| ID | 3908178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1486929 |
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| End bp | 1488068 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883199 |
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| Product | L-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_484926 |
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| Protein GI | 86748430 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.304754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA TCACCTGCAT CGAGGACCTT CGCCAGATTC ACAAGCGGCG GGTGCCGAAG
ATGTTCTTCG ACTATGTCGA CCACGGCTCC TATGCCGAGG AGACGCTCCG CGCCAATGTC
GACGACCTGA AGCGGATCAA GTTCCGCCAG CGCATCCTGG TCGACATCTC CAAGCGCGAT
CTGTCCACCA CCATCATCGG CGAGAAGTCG GCGATGCCGC TGATCCTGGC GCCGGTCGGC
TCCACCGGGA TGCAATATGG CGACGGCGAG ATCCACGCCT GCCGCGCCGC CCAGGCCGCC
GGCATCCCCT ACACGTTGTC GACGATGTCG ATCTGCTCGA TCGAGGACGT CGCGGCGAAT
GTCGACAAGC CGTTCTGGTT TCAGCTCTAC GTCATGAAGG ACCGCGGCTT CGTCAAGGCG
CTGATCGAGC GCGCGATCGC GGCCAAATGC AGCGCGCTGG TGCTGACCGT CGACCTGCAG
GTGATCGGCC AGCGCCATCA GGACATCAAG AACGGCATGA CGGTGCCGCC GGAGATCTTC
CGGCCGAAGA ACCTGCTCGA CATCGCCACC AAGCCCGGCT GGGTGAAGGG CATCCTCGGC
GCCAAGCAGC GCAATTTCGG CAACATCGCC GGGCACCTGC CCGGCTCCAA GGATCTGGAA
TCGGTGTCGG CCTGGGTGGC GTCGCAATTC GACGCCTCGC TGAACTGGAA GGACATCGAC
TGGATCCGCT CGATCTGGCC GGGCAAGCTG ATCATCAAGG GCATCCTCGA CGTCGAGGAT
GCCCGCGAGG CGGTGAAGGT CGGCGCCGAG GCGCTGGTGG TGTCGAACCA TGGCGGCCGC
CAGCTCGACG GCGCGCCGTC GTCGATCGAG GTGCTGCCGG AGATCGTCCA CACCGTCGGC
TCACATATCG AGGTGATGTT CGACGGCGGC ATCCGCTCCG GCCAGGACGT GATGCGAGCG
CTGGCGCTCG GCGCGCGCAG CTGCATGATC GGCCGCGCCT ACATCTACGG CCTCGGCGCC
TATGGCGGCC CCGGCGTCGC CAAGGCGATC GACATCATCG GCAAGGAGCT GTCGACCACC
ATGGGCCTGT GCGGCGTCAA TGCGATCAAC CAGATCGACG AGAAGGTGCT GGCGGAGTAA
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| Protein sequence | MKYITCIEDL RQIHKRRVPK MFFDYVDHGS YAEETLRANV DDLKRIKFRQ RILVDISKRD
LSTTIIGEKS AMPLILAPVG STGMQYGDGE IHACRAAQAA GIPYTLSTMS ICSIEDVAAN
VDKPFWFQLY VMKDRGFVKA LIERAIAAKC SALVLTVDLQ VIGQRHQDIK NGMTVPPEIF
RPKNLLDIAT KPGWVKGILG AKQRNFGNIA GHLPGSKDLE SVSAWVASQF DASLNWKDID
WIRSIWPGKL IIKGILDVED AREAVKVGAE ALVVSNHGGR QLDGAPSSIE VLPEIVHTVG
SHIEVMFDGG IRSGQDVMRA LALGARSCMI GRAYIYGLGA YGGPGVAKAI DIIGKELSTT
MGLCGVNAIN QIDEKVLAE
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