Gene RPB_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1298 
Symbol 
ID3908171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1480514 
End bp1481038 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content70% 
IMG OID637883192 
Producthypothetical protein 
Protein accessionYP_484919 
Protein GI86748423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0166833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCA CCAGACTGTT CGGTGTCACG GCTGTCGCGC TGGTCGCGTC GTTCGCGAGC 
GCGAGTGCGC AAGAGCGACT GCAGGTCGGC GTGCTCGAAT GCGCCGGTGG CCCGAACGTC
GGCTACGTCG TCGGCTCCAC CACCGAACTC GAATGCGTGT TCAACACCGC CGGCCGCCGG
CCGGAGCCGT ATGTCGCGCG CCTGCAGCGC ATCGGGCTCG ATCTCGGCTT CACCCAGAAC
ACGGGCATCG CCTGGGCGGT CTATGCGCCG ACCCGTCGGC TCGGCCGCGG CGACCTGTCC
GGCAGCTATG GCGGCGTCGG GGCCAACGCG TCGTTCGGCG TCGGCGTCGG CGGCAATCTG
CTGGTCGGCG GTTCGTCGAA CGCCTACGCG TTGCAGCCGC TCAGCCTGCA GGGCCAGACC
GGCCTGAACG CCACCGCCGG CATCGTCGAC GTGCAGCTCC GCCCGGCCGA TCTGCCGCAG
CGCAAGTACC GCAAGCACAA GCGCAAGCAT CGCCATCACC GCTGA
 
Protein sequence
MSITRLFGVT AVALVASFAS ASAQERLQVG VLECAGGPNV GYVVGSTTEL ECVFNTAGRR 
PEPYVARLQR IGLDLGFTQN TGIAWAVYAP TRRLGRGDLS GSYGGVGANA SFGVGVGGNL
LVGGSSNAYA LQPLSLQGQT GLNATAGIVD VQLRPADLPQ RKYRKHKRKH RHHR