Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1296 |
Symbol | |
ID | 3908169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1478043 |
End bp | 1478729 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883190 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_484917 |
Protein GI | 86748421 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.041604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGGAC CACAGGCGAG CGAAACGACC GCGATGTACA AGCTCTATTC GATGCAGCGA TCCGGCAACA GCTACAAGGC GCGGCTTGCG CTGGCGTTTC TGGGTGCGCC CTATCGCGCG ATCGAAGTCG ATATCCTGCG CGGCGAGAGT CGCACGCCGG AATTCCTCGC CAAGAATCCG AGCGGTCAGG TGCCGCTGCT GGAAGTCGCG CAAGGCCGCT ATCTGGCCGA ATCCAACGCG ATTCTGTGGT ACCTCGCCGT CGGCACTTCG CTGGCGCCGG ATACGCGGAT GGATCGCGCC GAAGCGCTGC AATGGATGTT CTTCGAGCAG CATGCGCTGG AGCCGAATAT CGGATCGGCT TACTTCTGGC TGTGCCTGGT GAAGGGCGGT CGCGACTTGC AGACCCACGC ACTCGAGGAC TGGCTGGAGC GGGGCTACGC CGCGCTGCAG GTGATGGAAA ATCACCTCAG GACTCACGAT TTCGTGGCGG CCGGCCAGCT CACCATCGCC GACATCGCGC TGTACGGCTA CACCCACGTC GCCGACCAGT GCGACTTCGA CCTGTCGACC TTCCCGGCGG TCAACGCGTG GCTGCGGCGG GTCGAGCAGA CGCCGGGCTT CATCACCATG GACTGGACGC CGGATTCGGC GCCGCACGAC CACGTCGATT TCGCCGCCGA GGCCTGA
|
Protein sequence | MPGPQASETT AMYKLYSMQR SGNSYKARLA LAFLGAPYRA IEVDILRGES RTPEFLAKNP SGQVPLLEVA QGRYLAESNA ILWYLAVGTS LAPDTRMDRA EALQWMFFEQ HALEPNIGSA YFWLCLVKGG RDLQTHALED WLERGYAALQ VMENHLRTHD FVAAGQLTIA DIALYGYTHV ADQCDFDLST FPAVNAWLRR VEQTPGFITM DWTPDSAPHD HVDFAAEA
|
| |