Gene RPB_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1296 
Symbol 
ID3908169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1478043 
End bp1478729 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID637883190 
Productglutathione S-transferase-like protein 
Protein accessionYP_484917 
Protein GI86748421 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.041604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAC CACAGGCGAG CGAAACGACC GCGATGTACA AGCTCTATTC GATGCAGCGA 
TCCGGCAACA GCTACAAGGC GCGGCTTGCG CTGGCGTTTC TGGGTGCGCC CTATCGCGCG
ATCGAAGTCG ATATCCTGCG CGGCGAGAGT CGCACGCCGG AATTCCTCGC CAAGAATCCG
AGCGGTCAGG TGCCGCTGCT GGAAGTCGCG CAAGGCCGCT ATCTGGCCGA ATCCAACGCG
ATTCTGTGGT ACCTCGCCGT CGGCACTTCG CTGGCGCCGG ATACGCGGAT GGATCGCGCC
GAAGCGCTGC AATGGATGTT CTTCGAGCAG CATGCGCTGG AGCCGAATAT CGGATCGGCT
TACTTCTGGC TGTGCCTGGT GAAGGGCGGT CGCGACTTGC AGACCCACGC ACTCGAGGAC
TGGCTGGAGC GGGGCTACGC CGCGCTGCAG GTGATGGAAA ATCACCTCAG GACTCACGAT
TTCGTGGCGG CCGGCCAGCT CACCATCGCC GACATCGCGC TGTACGGCTA CACCCACGTC
GCCGACCAGT GCGACTTCGA CCTGTCGACC TTCCCGGCGG TCAACGCGTG GCTGCGGCGG
GTCGAGCAGA CGCCGGGCTT CATCACCATG GACTGGACGC CGGATTCGGC GCCGCACGAC
CACGTCGATT TCGCCGCCGA GGCCTGA
 
Protein sequence
MPGPQASETT AMYKLYSMQR SGNSYKARLA LAFLGAPYRA IEVDILRGES RTPEFLAKNP 
SGQVPLLEVA QGRYLAESNA ILWYLAVGTS LAPDTRMDRA EALQWMFFEQ HALEPNIGSA
YFWLCLVKGG RDLQTHALED WLERGYAALQ VMENHLRTHD FVAAGQLTIA DIALYGYTHV
ADQCDFDLST FPAVNAWLRR VEQTPGFITM DWTPDSAPHD HVDFAAEA