Gene RPB_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1288 
Symbol 
ID3908161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1470656 
End bp1471597 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content67% 
IMG OID637883182 
Productaldo/keto reductase 
Protein accessionYP_484909 
Protein GI86748413 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTC GTAATCTCGG CGGCAGCGGG CTGCGCGTCT CCGTCGTCGG CCTCGGCTGC 
AACAATTTCG GCCAGCGCAC CGACCCCGAC ACTTCGCGCA AGGTCATCCA CAAGGCGATC
GATCTCGGCG TCACGCTGTT CGACACCGCC GACATCTATG CGGGCCAGGG CGGCTCCGAG
ACGGTGCTCG GCGACGTGCT CGGCGATCGC CGCAAGGACA TCGTGCTGGC AACCAAATTC
AGCAAGCCGA TGGCCGCCGA CGGCACCAAG CAGGGCGCGT CGCGGCGCTA CATCGTCGCC
GCCGTCGAGG CCAGCCTCAA GCGGCTGAAG ACCGACTGGA TCGACCTGTA CCAGCAGCAC
GATTACGACG AGCTGACGCC GATCGACGAG ACGCTGCGCG CGCTCGACGA CCTGATCCGC
GCCGGCAAGG TGCGCTACAT CGGCAATTCG AATTTCCCGG CGTGGCGCAT TGCCGAGGCC
GAATACGTCG CCCGCGCGCT CGGCACGCAT CGCTTCGTGT CGTGCCAGGA CGAATACAGC
CTCGTCGTCC GCGACATCGA GAAGGATCTG CTGCCGGCGG CGCAGGAATA CAAGCTCGGC
CTGCTGCCGT TCTTCCCGCT GGCCAGCGGC CTGCTGACCG GCAAGTATCA GCGCGGCGCC
GAGGCGCCGG CGCACACCCG CTTCGCCAAG ATGCCGGCGA TCCGCGACCG CTACTTCACC
GAGGTCAATC TCGTCGTCGT CGACCGGCTC AAGGCGTTCG CGGAGTCGCA CGGCAAGTCG
CTGCTCGACC TCGCCTTCTC CTGGCTCGCC TGCCGCCCGC AAGTCTCCAG CGTGATCGCC
GGCGCCACCT CGCCGGAGCA GATCGAGCAG AACGTCAAGG CGGCGAGCTG GCAGCTCGGC
GCCGAGGAGA TGGCGGAGAT CGATACGATT ACGAAGGGGT AG
 
Protein sequence
MQLRNLGGSG LRVSVVGLGC NNFGQRTDPD TSRKVIHKAI DLGVTLFDTA DIYAGQGGSE 
TVLGDVLGDR RKDIVLATKF SKPMAADGTK QGASRRYIVA AVEASLKRLK TDWIDLYQQH
DYDELTPIDE TLRALDDLIR AGKVRYIGNS NFPAWRIAEA EYVARALGTH RFVSCQDEYS
LVVRDIEKDL LPAAQEYKLG LLPFFPLASG LLTGKYQRGA EAPAHTRFAK MPAIRDRYFT
EVNLVVVDRL KAFAESHGKS LLDLAFSWLA CRPQVSSVIA GATSPEQIEQ NVKAASWQLG
AEEMAEIDTI TKG