Gene RPB_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1284 
Symbol 
ID3908157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1468487 
End bp1469020 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content68% 
IMG OID637883178 
Producthypothetical protein 
Protein accessionYP_484905 
Protein GI86748409 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCG CCAGCGACCA GATCAAGCCG CAGTCCTATC ATTTCGACGA CGACGGGCTG 
ATCCCGAACA ATCCGATGCC GCTGCTGATC TACAAGCGCG CCGTCGAGGT TGGGCGCGAC
GGCCCCGCGG AGGCGATCGA GGCGCTGTTC GGCCGCAACG GCTGGGGCCA GATGTGGCGC
AACGGCATTT TCGACTACGC GCATTATCAC GCCACGGTGC ACGAGGCGCT CGGCGTCGCG
CGCGGCCATG CGCTGGTGCT GTTCGGCGGC GACCAGGGCG AGGCGATCGA GCTGACGCCC
GGCGATGTCG CAGTGCTGCC GGCCGGCACC GGCCACAAGC GACTGTTCGC CTCGCATGAT
TTCCAGGTGG TCGGCGCCTA TCCGCCCGGC CCCGAGATGC AGATCATGCG GCCGACGCCG
GACAATTATC GCCGGGCGCT GAAGACCATC CCGCAGGTGC CGCTGCCGCA GACCGATCCG
GTCGCCGGCG AGGACGGGCC GCTGATGCGG CTGTGGGGCA AGTCATCGCA TTGA
 
Protein sequence
MSLASDQIKP QSYHFDDDGL IPNNPMPLLI YKRAVEVGRD GPAEAIEALF GRNGWGQMWR 
NGIFDYAHYH ATVHEALGVA RGHALVLFGG DQGEAIELTP GDVAVLPAGT GHKRLFASHD
FQVVGAYPPG PEMQIMRPTP DNYRRALKTI PQVPLPQTDP VAGEDGPLMR LWGKSSH