| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1276 |
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| Symbol | |
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| ID | 3908149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1462058 |
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| End bp | 1463437 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883170 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_484897 |
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| Protein GI | 86748401 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTTC TCATCGTCGG CACCCTGAAG GGCCAACTCA CAACCGCGAC CAAGATCGCG
ATCGACAACG GCGCGTCCGT CACCCACGCC GACGACAACG AACAGGCGTT GCGGGTGCTG
CGCGGCGGCA AGGGCGCCGA TCTGCTGCTG GTCGACGTCG CGATCGACAT CCGCGATCTG
GTGATGCGGC TGGAGGCCGA ACACATCCAC GTGCCGATCG TCGCCTGCGG CATCGCCAAC
GACGCCCGCG CCGCGGTCGC CGCGATCCAC GCCGGCGCCA AGGAGTACAT CCCGCTGCCG
CCGGATCCGG AACTGATCGC GGCGGTGCTG GCCGCGGTCG CCAATGATTC CCGCGAACTG
GTGTATCGAG ACGAGGCGAT GGCCAAGGTG GTGAAGCTGG CGCAGCAGAT CGCCGGTTCG
GACGCCTCGG TGATGATCAC CGGCGAGAGC GGCACCGGCA AGGAAGTGCT GGCGCGCTAC
GTCCACACCC GCTCGCACCG GGCGAAGAAG CCGTTCATCA GCATCAATTG CGCGGCGATT
CCGGAACACC TGCTCGAATC CGAATTGTTC GGCCACGAGA AGGGCGCCTT CACCGGCGCG
GTGGCGCGCC GCATCGGCAA GTTCGAGGAA GCGACCGGCG GCACGCTGCT GCTCGACGAA
ATTTCCGAGA TGGACGTGCG GCTGCAGTCG AAGCTGCTGC GCGCGATCCA GGAGCGGGTG
ATCGACCGCG TCGGCGGCAG CCGCCCGGTG CCGGTCGACA TCCGCATTCT CGCCACCTCG
AACCGCAACC TGCAGGACGC GGTGCGCGCC GGCACTTTCC GCGAGGATCT GCTGTTCCGG
CTCAACGTCG TCAACCTGAA GATTCCGCCG CTGCGTGAAC GGCCGGCGGA TATTCTCGAA
CTGGCGCAGC ATTTCGCCCG CAAATACGCC GACGCCAACG GCGTGCCGGT GCGGCCGATT
TCGGCCGACG CGCGGCGCGT GCTCACCACC AACCGCTGGC AGGGCAACGT CCGTGAGTTG
GAGAACACGA TTCACCGCGC GGTGCTGATG GCGCAGGGCG ACGAGATCGG CGCCGGTGCG
ATCCTGACGC CGGACGGCGA CCGGCTCGAT CAGGCCAAGA CGCCGCCGGC GGTGGCGCAC
GCCACCTTCG CGGCCGAGCA GGTGACCCGC GCGCTGGTCG GCCGAACCGT CGCCGACGTC
GAGCGCGACC TGATCCTGGA AACGCTGAAG CACTGCCTCG GCAACCGCAC CCACGCGGCG
AATATTCTGG GCATCTCGAT CCGCACGCTG CGCAACAAGC TCAACGAATA TGCCGACGGC
GGCCTGCCGA TTCCGGCCGC CGGCGGCGGC GAACACCGCG CCTTCGTGCA GACGGCGTGA
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| Protein sequence | MRLLIVGTLK GQLTTATKIA IDNGASVTHA DDNEQALRVL RGGKGADLLL VDVAIDIRDL
VMRLEAEHIH VPIVACGIAN DARAAVAAIH AGAKEYIPLP PDPELIAAVL AAVANDSREL
VYRDEAMAKV VKLAQQIAGS DASVMITGES GTGKEVLARY VHTRSHRAKK PFISINCAAI
PEHLLESELF GHEKGAFTGA VARRIGKFEE ATGGTLLLDE ISEMDVRLQS KLLRAIQERV
IDRVGGSRPV PVDIRILATS NRNLQDAVRA GTFREDLLFR LNVVNLKIPP LRERPADILE
LAQHFARKYA DANGVPVRPI SADARRVLTT NRWQGNVREL ENTIHRAVLM AQGDEIGAGA
ILTPDGDRLD QAKTPPAVAH ATFAAEQVTR ALVGRTVADV ERDLILETLK HCLGNRTHAA
NILGISIRTL RNKLNEYADG GLPIPAAGGG EHRAFVQTA
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