| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1263 |
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| Symbol | |
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| ID | 3909197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1445406 |
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| End bp | 1446857 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883157 |
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| Product | hydrogenase 4 subunit F |
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| Protein accession | YP_484884 |
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| Protein GI | 86748388 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0336263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGT CCGGCCTCGA TCCGGTGGTG GGGGTGCTGC TGATCCCGGT CTGCGCCGCC
ATCGTGCTGG CGCTGCTGCC GGGCTACAGG CTGACCGCGC GGCTCAACGT CGTCGCGAGT
CTGGGGAGCT TTCTCTGCGC CGCCTCGCTG CTGGTGCTGC CGCGGCCGCT ACCGGGCCCG
TACATCCTGG TCGACGATCT CAACATCGTC TTCATCGTGC TCAACACCTT CGTCGGCTTC
ACCACCAGCC TGTTCAGCGC CAGCTACATC GCCCACGAAC TCGAAACCGG CAAGCTGACG
CCGACCTATC TGCGATTCTA CCACGCGATG TACCAGATCA TGATGTTCGG CATGAATCTG
GCGTTCATGT CGAACAATAT CGGGCTGATG TGGGTCGCGG TCGAACTGGC GACGCTGACC
ACGGTGCTGA TGGTGGGGAT CTATCGCTCG CCGGCGGCGC TGGAGGCGGC CTGGAAGTAC
TTTATCCTCG GCAGCGTCGG CATCGCGCTG GCGCTGTTCG GCACCATCCT GGTCTACATG
GCGGCGCGGC CGGTGGTCGG CGAGGGCCAG GACGGCATGA TCTGGACCGT GCTGGTGGCG
CGCGCCGCGG GCTTCGATGC GCCGCTGTTG AACGTCGCCT TCGTGTTCCT GTTCCTCGGC
TACGGCACCA AGGTCGGGCT GGCGCCGCTG CACGCCTGGC TGCCGGACGC CCACGCCGAG
GGCCCGACGC CGATCTCGGC GGTGCTGTCG GGCCTGTTGC TCAACGTGGC GCTGTACGCG
CTGCTGCGCT TCAAAATGCT GCTCGCCGCC AATGGCGACG CGATGCCGCC CGGCGTGCTG
ATGATCGTGA TGGGGCTGGC GTCGCTCTTG TTCGCCGCCT TCATGCTGTA TCGGCGGCGC
GACATCAAAC GGCTGTTCGC CTATTCGTCG ATCGAGCACA TGGGCATCAT CGTGTTCGCC
TTCGGCATGG GCGGACCGCT GGCGAATTTC GCCGGGCTCC TGCACATGGT GATGCACAGC
CTGACCAAAT CGGCGATCTT CTTCGCGGTC GGCCACATCA CCCAGGTCAA GGGCACGCAG
TCGCTGGCGA AGATCCGCGG CATCACCGAG ACCCATCCGG TGCTCGGCTG GGGCCTCGTC
GTCGGCGTGG CGGCGATTGC CGGGTTGCCG CCGCTCGGCA TCTTCATGAG CGAGTTTCTG
CTGGTGTCCT CGACCTTCGC GCGGGCGCCT TGGCTGGCGC TGCTGCTGGT GTTCGGCATT
CTGGTGGCGT TCGGCGCGCT GATGCTGCGG CTGACCGGCA TCGCCTTCGG CCGGCCGCGC
GGCAGCCGGC AGCCGGTGCA GGCGTCCTAT GTGCCGATGT TCGCGCATCT GGCGCTGGTG
CTGATCGCCG GCGTGTATCT GCCGGCGCCG GTGGTGGCGT GGTTCCAGCA CGTCGCGAAA
CTGCTGGGCT AG
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| Protein sequence | MNLSGLDPVV GVLLIPVCAA IVLALLPGYR LTARLNVVAS LGSFLCAASL LVLPRPLPGP
YILVDDLNIV FIVLNTFVGF TTSLFSASYI AHELETGKLT PTYLRFYHAM YQIMMFGMNL
AFMSNNIGLM WVAVELATLT TVLMVGIYRS PAALEAAWKY FILGSVGIAL ALFGTILVYM
AARPVVGEGQ DGMIWTVLVA RAAGFDAPLL NVAFVFLFLG YGTKVGLAPL HAWLPDAHAE
GPTPISAVLS GLLLNVALYA LLRFKMLLAA NGDAMPPGVL MIVMGLASLL FAAFMLYRRR
DIKRLFAYSS IEHMGIIVFA FGMGGPLANF AGLLHMVMHS LTKSAIFFAV GHITQVKGTQ
SLAKIRGITE THPVLGWGLV VGVAAIAGLP PLGIFMSEFL LVSSTFARAP WLALLLVFGI
LVAFGALMLR LTGIAFGRPR GSRQPVQASY VPMFAHLALV LIAGVYLPAP VVAWFQHVAK
LLG
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