| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1260 |
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| Symbol | |
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| ID | 3909194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1441778 |
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| End bp | 1443796 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883154 |
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| Product | hydrogenase 4 subunit B |
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| Protein accession | YP_484881 |
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| Protein GI | 86748385 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0751084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC TTGCGGTTCA GCTCTGGTGC GTGGCGGTGC TGCTCGCGAT CGCGGTCATC
GCGGTTCCGC TGAGCCGGAG GCCGGGCCTC GCCACCGCAA CCATCTATTC CGCGACGCTG
GTCACCTGCG CGGTCGCCAC CGCCAGCGCA CTGACCTGGC TGCTGCTGCA TGCGGACGCC
GCCGCCCAGC GCACGCTGCC GATCGGGCTG CCCTGGCTCG GCGCGCATCT GCGGCTCGAT
GCGCTCGCGG CGTTCTTCCT CGTCGTGGTC AATCTCGGCG GCACGCTGGC GAGCCTGTAT
GCGCTCGGCT ATGGCCGGCA CGAGCACGCG CCGCATCGCG TGCTGCCGTT CTATCCGGCG
TTTCTGGCCG GCATGAACAT GGTGGTGCTC GCCGCCGACG CGTTTTCTTA TCTGCTGAGC
TGGGAATTCA TGTCGCTGGC GTCGTGGGCG CTGGTGATGG CGCATCACCG CGACGGATCC
AATCGCCGCG CCGGCTATGT CTATCTGCTG ATGGCGAGTT TCGGCACGCT GGCGCTGCTC
TTGGCGTTCG GCCTGCTCGC GGGCGCCGCC GGAAATTACG ATTTCGCCGC GATCCGCGCC
GCGCAGCACG CGCCGTGGAT CGCGACGCTG GTGCTGATCC TGCTGCTGCT CGGCGCCGGC
TCCAAGGCCG GGCTTGTCCC CTTGCATGTC TGGTTGCCGC TGGCGCATCC GGCGGCGCCG
AGCCACGTCT CGGCGCTGAT GAGCGGCGTG ATGACCAAGG TCGCGGTCTA CGGCTTCATC
CGCGTGGTGT TCGATCTGCT CGGCACGCCG GACTGGTCGA CCTCCGGGAT CGTGCTGGCG
CTCGGCGGCA TCACGGCGGC GCTCGGCATT CTTTATGCGC TGATGGAGAA GGACCTGAAG
CGGCTGCTGG CCTATTCGAC GATCGAGAAT GTCGGCATCA TCTTCGTCAG CCTCGGCCTC
GCGCTGGCGT TCCAGGCCAA TCATCAGCCG CTGCCGGCGG CGCTGGCCTT CACCGCGGCG
CTGTTCCACG TGCTCAACCA TTCGCTGTTC AAGAGCCTGC TGTTCTTCGG CGCCGGCGCG
GTGCTGAGCG CCACCGGCGA GCGCGACATG GACAAGCTCG GCGGACTGAT CCATCGCATG
CCGGTGACCA GCGTGGTGTT CCTGATCGGC AGCGTCGCGA TCTCGGCGCT GCCGCCGTTC
AACGGCTTCG TCTCGGAATG GCTGATCTTC CAGGCGGTGC TGCAGAGCCC GCAACTGCCG
CAATGGGGAT TGAAAATTCT GGTGCCGGCG GTCGGCGGCT TGATGGCGCT CGCGGCGGCG
TTGGCGGCGG CGTGTTTCGT CAAGGCCTAT GGCGTGACGT TCCTCGGCCG GCCGCGCGGC
GCCGCGACGC TGGCTGCCAA AGAGGTCGAT CGCTTCTCGC TCGCCGCGAT GGCGATCCTC
GCCGCGCTGT GTCTCGCCGC CGGCGTGCTG CCCGGACTGG TGATGGACAC GCTGGCGCCG
ATCGCGACCG AGATTCTCGG CAGCCGGCTG GCGCCACAAA CGCCGCTCGC CTGGCTGTCG
ATCGTGCCGA TCGCGCAAAG CCACAGCTCC TATAATGGCC TGCTGGTCGC ATTGTTCATC
GCGGTGTCGG CGTCGTTGCT GTTCGTCGCG ATCCGGCTGT TCTCGTCGGG CGCGGTCCGC
CGCGGCCCGG CCTGGGGCTG CGGCTTCACC GAGCCTGCGC CGCTCGCGCA ATATTCCGCG
GCCGGCTTCG CGCAGCCGAT CCGCCGGGTG TTCGGCACGC TGATCTTCCG CGCCCGCGAT
CACGTCACGA TGCCGCCGCC GGGCGACACG GCGCCGGCGC GGCTGCGGAT CGAACTGCAC
GACCAGATCT GGGAGCGGAT CTACGCGCCG CTCGCCGGCG GCGTCATGGC CGCCTCGGTG
CGCCTCAACC GGATGCAGCT CCTCACCATC CGCGGCTATC TCAGCCTGGT GTTCGCCACC
CTCGTCACGC TGCTGCTGGT GCTCGCGATA TGGACGTGA
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| Protein sequence | MTELAVQLWC VAVLLAIAVI AVPLSRRPGL ATATIYSATL VTCAVATASA LTWLLLHADA
AAQRTLPIGL PWLGAHLRLD ALAAFFLVVV NLGGTLASLY ALGYGRHEHA PHRVLPFYPA
FLAGMNMVVL AADAFSYLLS WEFMSLASWA LVMAHHRDGS NRRAGYVYLL MASFGTLALL
LAFGLLAGAA GNYDFAAIRA AQHAPWIATL VLILLLLGAG SKAGLVPLHV WLPLAHPAAP
SHVSALMSGV MTKVAVYGFI RVVFDLLGTP DWSTSGIVLA LGGITAALGI LYALMEKDLK
RLLAYSTIEN VGIIFVSLGL ALAFQANHQP LPAALAFTAA LFHVLNHSLF KSLLFFGAGA
VLSATGERDM DKLGGLIHRM PVTSVVFLIG SVAISALPPF NGFVSEWLIF QAVLQSPQLP
QWGLKILVPA VGGLMALAAA LAAACFVKAY GVTFLGRPRG AATLAAKEVD RFSLAAMAIL
AALCLAAGVL PGLVMDTLAP IATEILGSRL APQTPLAWLS IVPIAQSHSS YNGLLVALFI
AVSASLLFVA IRLFSSGAVR RGPAWGCGFT EPAPLAQYSA AGFAQPIRRV FGTLIFRARD
HVTMPPPGDT APARLRIELH DQIWERIYAP LAGGVMAASV RLNRMQLLTI RGYLSLVFAT
LVTLLLVLAI WT
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