| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1254 |
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| Symbol | |
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| ID | 3909188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1435621 |
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| End bp | 1436772 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883148 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_484875 |
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| Protein GI | 86748379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.27241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGCC CGCGCTTTCT CAGCCGCTCC GACCTGATCG GTCTCGCCGC GCTCGCTCTG
CTCCTGGTCG TGATCCTGCC GCTGTCGCTG GATGTGTTCC GCCTCAACCT GGTGGCGAAG
TATCTGACCT ACGCCTTCGT GGCGCTCGGT CTGGTGCTGT GCTGGGGCTT CGGCGGCATC
TTGAGCCTCG GGCAGGGGGT GTTCTTCGGC CTCGGCGGCT ACGGCATGGC GATGTATCTG
AAGCTGGAAG CCTCCAGCGT CGCCAACACC AAGATCCAGT CCACGCCCGG CATCCCGGAT
TTCATGGACT GGAACCAGAT CACGCAATTG CCGCTGTTCT GGCAGCCGTT CCACAGCCTG
ACGCTGACGA TCCTCGCGAT CCTGATCGTG CCGACGCTGT TCGCCTATCT GATCGGCGCG
GCGATGTTCA AGCGGCGCGT CGGCGGCGTG TATTTCGCCA TCATCACCCA GGCGATCGCC
GCGATCCTCA CCATCCTGAT CATCGGCCAG CAGGGCTACA CCGGCGGCAT CAACGGCATC
ACCGATCTGC GCACGCTGAA GGGCTGGGAC ATCCGTCCCG ACCACGCCAA GGTGGTGCTT
TACTTCGTCG AGGTGGCGTT CCTGTTCGGC TGCATCCTGC TGGCGCTGTT CGTGCGCCAC
TCCAAGCTCG GCCGCATCCT GGTGGCGATG CGCGAGAAGG AGGACCGGGT GCGGTTCTCC
GGCTACAGCG TCGCCAATTT CAAGATCTTC GCGTTCTGCC TGGCGGCGAT GTTCGCGGCG
ATCGGCGGCG CGATGTTCAC GCTCAATGTC GGGTTCATGT CGCCGTCCTT CGTCGGCATC
GTGCCGTCGA TCGAGATGGT GATTTACACC GCGGTCGGCG GCCGGCTGTC GATCTTCGGC
GCGATCTACG GGACGCTGCT GGTCAATTTC GCCAAGACCA GCCTGTCGGA ATCCTTCCCG
CAGCTCTGGT TGTTCGGGCT CGGCGCGCTG TTCATCGCGG TGGTGCTGAT CTTCCCGAAC
GGACTCGCCG GGATCTGGCG CGACCACGTC CAGCCGCTGA TCGACAAGGT CCTCAACAGG
CGCAAATCCG GCTCGGATCA CACCAGCGGC AAGACGCTCG GCCCGGTCGC CGGCGGCGCT
CCGGCGGAAT AG
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| Protein sequence | MESPRFLSRS DLIGLAALAL LLVVILPLSL DVFRLNLVAK YLTYAFVALG LVLCWGFGGI
LSLGQGVFFG LGGYGMAMYL KLEASSVANT KIQSTPGIPD FMDWNQITQL PLFWQPFHSL
TLTILAILIV PTLFAYLIGA AMFKRRVGGV YFAIITQAIA AILTILIIGQ QGYTGGINGI
TDLRTLKGWD IRPDHAKVVL YFVEVAFLFG CILLALFVRH SKLGRILVAM REKEDRVRFS
GYSVANFKIF AFCLAAMFAA IGGAMFTLNV GFMSPSFVGI VPSIEMVIYT AVGGRLSIFG
AIYGTLLVNF AKTSLSESFP QLWLFGLGAL FIAVVLIFPN GLAGIWRDHV QPLIDKVLNR
RKSGSDHTSG KTLGPVAGGA PAE
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