| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1253 |
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| Symbol | |
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| ID | 3909187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1434683 |
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| End bp | 1435609 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637883147 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_484874 |
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| Protein GI | 86748378 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.27605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCG ATTATTCCAT TGGCGATCTC GGCGCGATCT TCGCGATGCA GGGCTTCGCG
GGTCTGATCC TGTTCTCGGT CTATGTGCTG ATGGCGCTCG GGCTGGCGAT CATCTTCGGC
CAGATGGGCG TCATCAACAT GGCGCATGGC GAGTTCATGA TTCTCGGCGC CTACGTCACC
TGGATGACGT CGAGCGCCTT TCAGGCCTAT CTGCCGTCGC TGTTCCCCGG CTACTTCTTC
GTCGCCATGA TCCTGGCCTT CATCGCCGCG GGCGCGCTCG GCATGCTGGT CGAATGGGGG
CTGATACGCC ATCTCTACAA GCGCCCGCTC GATACGCTGC TGGCGACCTG GGGCCTGTCG
CTGATCCTGC AGCAGGCCTA TCGGTCGATC TTCGGCGCGC GTGAAGTCGG CGTCGAGCTG
CCGCAATGGA TGCTCGGCTC CAAGCAGATC ACCGACACCA TCGAGGTGCC GATCAACGGC
ATCTTCGTGA TGTGCCTGAC CTTCCTGATC ACCGCCGCCG TCGCCTATGT GATGTACAAA
TCGCGCTGGG GCCGCCAGGT TCGCGCCGTG GTGCAGAACC GGGTGATGGC CGGCGCCGTC
GGCATCAACA CCGAGAAGGT CGATCGCTAC ACTTTCGGGC TGGGCTGCGG CATCGCCGGA
ATCGCGGGTT CGGCCTTCAC CATGATCGGC TCGACCGGGC CGACCTCCGG CCAGCTCTAC
ATCGTCGACA CCTTCCTGGT CGTGGTGTTC GGCGGCGCGG CGAGCCTGTT CGGCACCATC
GCATCGGCCT TCAGCATCTC GCAGGCGCAG TCGACCATGG AGTTCTTCAT GTCCGGCTCG
ATGGCCAAGG TGCTCACATT GCTCGCCATC GTCGCGATCC TGATGGTTCG CCCGCAAGGC
CTGTTCGCCC TCAAGGTTCG CAAATAG
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| Protein sequence | MFGDYSIGDL GAIFAMQGFA GLILFSVYVL MALGLAIIFG QMGVINMAHG EFMILGAYVT
WMTSSAFQAY LPSLFPGYFF VAMILAFIAA GALGMLVEWG LIRHLYKRPL DTLLATWGLS
LILQQAYRSI FGAREVGVEL PQWMLGSKQI TDTIEVPING IFVMCLTFLI TAAVAYVMYK
SRWGRQVRAV VQNRVMAGAV GINTEKVDRY TFGLGCGIAG IAGSAFTMIG STGPTSGQLY
IVDTFLVVVF GGAASLFGTI ASAFSISQAQ STMEFFMSGS MAKVLTLLAI VAILMVRPQG
LFALKVRK
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