| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1251 |
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| Symbol | |
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| ID | 3909185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1429714 |
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| End bp | 1433082 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883145 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_484872 |
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| Protein GI | 86748376 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0612415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGGGC GGCAGCGCAT AGACCGCGTT CGGCGCCAGT ACAATCAATG GGTCGCCAAC
CAGACGCTCG AAGACTATGC GCTGCGCTTC ACCGCCAAGA GCGCGCGCCG CTGGTCGGCG
CTGCGGGTCG CCAACACCGC GCTCGGCGCG ATTTCGTTCC TGGCGCTGGA GGCGATCGGC
GGCACCATCA CGCTGAATTA CGGCGTCACC AACGCCACCG CGGCGATCCT CGTGGTCAGC
GTCATCATCT TCTGCTGCGG CCTGCCGATT GCCTATCATG CAGCCAGATG TGGCGTCGAT
ATAGACTTGC TCACGCGCGG CGCCGGATTC GGCTATATCG GATCGACGAT CACCTCGCTG
ATCTATGCCT CATTTACGTT CATCTTCTTC GCCATCGAGG CTGTTATCCT CGCCAAGGCG
CTGGAGATGT GTTTCGGGCT GCCGCTGGCG CTGGGCTATC TGTTCAGCGC CGTGGTGATC
ATTCCGCTGG TGACGCACGG CATCACGCTG ATCAGCCGGT TTCAACTGTG GACCCAGCCG
TTCTGGATTC TGCTGCACAT CCTCCCGTTC GCGGCGATCG CGATCAAGAG TCCGGAATCG
TTCGAAGAGT GGACCAGATT CGCCGGCGCG CAGGGCGATC CGGCGGGCCA TCTCGACCTG
CTGCTGTTCG GCACCGCGGC GTCGGTGGTG TTCGCGCTGG TGGCGCAGAT CGGCGAGCAG
GTCGACTTTC TCCGCTTCCT GCCGCGCGAC CGCCGCACCT CGAAGGCGGC GTGGTGGGCG
GCGATGATCA GCGCCGGGCC GGGCTGGATC GTGCCGGGCG CGATCAAGCT GCTGGCCGGC
TCGTTCCTCG CCTATTTCGC CCTGAGCCAT GGCCTCGACA TGGAGGACGC GGCGGAGCCG
TCGCACATGT ATCGCGAGGC GTTCCGTTAC GTGCTGGCGC AGCCCGAACT GGCGCTTGCG
CTGACCGGCG CCTTCGTGAT GCTGTCCCAG ATCAAGATCA ACGTCACCAA CGCCTATGCG
GGCTCGATCG CCTGGTCGAA CTTCTTCTCG CGGCTGACCC ATTCGCATCC CGGCCGCGTG
GTCTGGCTGG TGTTCAACGT GCTGGTGGCG CTGCTGCTGA TGGAGATCGG CGTCTACAGG
GCGTTGGAGC AGACGCTGGC GCTGTATTCC AACGTGGCGA TCGCCTGGGT CGGCGCCCTA
GTGGCGGATC TGGTCATCAA CCGGCCGCTG GGCCTGCGGC CGCGGCAGAT GGAGTTCAAG
CGCGCGCATC TCTACGACAT CAATCCGGTC GGCGTCGGCT CGATGGCGAT CGCCACGGTG
ATGTCGATCA CCGCGTTCTA CGGCGTGTTC GGGCCGACCG CCAAGGCGCT GGCGCCGTTC
GTCGCGTTGC TGGTGGCGTT CGTCACCGCG CCGGCGATCG CGCTGCTCAC CCGCGGCCGG
TTCTATATCG CGCGCAAGCC GAAGCGCTCC TGGCAGAACC TGCCGGCGAT CAAGTGCTGC
ATCTGCGAGC ATTCGTTCGA GCCCGAGGAC ATGGCGCATT GCCCGGCCTA TGCCGGGCCG
ATCTGCTCGC TGTGCTGCTC GCTCGACGCC CGCTGCCACG ATCTGTGCAA GCCGCACGCG
CGGTTCGACG CGCAATTCAC CGACGCGCTC GGCAAGGTGC TGCCGCAGCG CGTCCATGCG
CTGCTGAATT CGCAGGTCGG GCACTATCTC AGCGTGTTCA TGGTGTCGGC CGGGCTGGTC
GGCCTGACGC TGATGATGAT CTATCTGCAG GCCGCACCCG CCACCGACGC GCAGCAGATC
CTGCTGTCGG AAATTCTCTG GAAGCTGTTC TTCGCGCTGT CGATCATCAT CGGCGTGGTG
ACCTGGCTGT TCGTGCTGGC GCGGCAGAGC CGGCAGGCCG CCGAGGCCGA GACCCGGCGC
CAGACCACGC TGCTGATGCA GGAGATCGAC GCGCACCGCC AGACCGACGC CGAGCTGCAG
CGCGCCAAGG AGGTCGCCGA ATCGGCCAAT CTCGCCAAGA GCCGCTACGT CGTCGGCCTC
AGCCACGAGC TGCGCTCGCC GCTCAACGCC ATCAGCGGCT ACGCGCAATT GCTCGAACAG
GACGCCAGCC TGCCGCCGCG CCCGCGCGAC CAGATTCGCC TGATGCGACG CAGCGCCGAT
CATCTCTCCG GGCTGATCGA CGGATTGCTG GATATTTCCA AGATCGAGGC CGGCCGGCTG
TATCTGTCGC GCGACGAGGT GCGGTTCGGC GAATTTCTCG ACCAGCTCGT CGGCATGTTC
CGGCTGCAGG CGACCGCCAA GGACGTCGAC TTCGTGTTCA AGCGCCCGCA ATATCTGCCG
CCGGTGGTCT ACGCCGACGA GAAGCGGCTG CGCCAGGTGC TGATCAATCT GCTCTCCAAC
GCGATCAAGT TCACGCAAGA AGGCAGCGTG CATTTCATCG TGCATTATCG CAACCCGGTG
GCCGAGCTCG AAGTGCGCGA CACCGGCCCG GGCATCCATG CCGACGATCT GGAGCGGATC
TTCGCGCCGT TCGAACGCGG CGCGCTCGGC GTATCGCAGC CGCACACCGG CACCGGGCTC
GGGCTGACGA TCAGCAAGCT GCTCGCCGGC GTGATGGGCG GCGATCTCAG CGTCACCAGC
ACGCTCGGCC AGGGCTCGAC CTTCCGCGTC AAGCTGCTGC TGTCGGAAGT CACCAATCCG
ACCCGCACCC GCGCGATCCG CGCGCCGATC CTCGGCTATC ACGGCCCGCG CAAGACCATC
CTGATCACCG ACGACGATCC GGCGCAGCGT AATCTGCTGC AGGAATTGCT GGCGCCGCTC
GGCTTCATCG TGCTGAGCGC GCCGGACGGC TACACCTGCG TCGGCCTCGC CGAACACTGC
CAGCCCGACC TGTTCCTGCT CGACATCTCG ATGGCCGGCA TGGACGGCTG GACCGTGGCC
GAGACGCTGC GCACCAACGG CCACCACCAC GCCCGCATCC TGATGGTGTC GGCGAGCGCG
ATCGAGGCGC ACGGCGCGCC GCTGGCGCAG CCGTTCCACG ACGGCTACCT GATGAAGCCG
GTCGACATTC CGCGGCTGCT CGAACAGATC GGGCAGCTGC TCAAGATAGA ATGGATCTAC
AAAGGCGAAA CGCCCGAGAC GCCGGCGGCC ACGGGCGATA TGCAAAGCCC GCCGATGCAG
CACGTCGAGG AATTGATCGA GCTCGGCAAG ATCGGCTACA TCCGCGGCAT CGAATCCAAG
CTCGATCAGA TCGACAACGA CTATCCGGAA TCGGGGACGT TCGTGTCGCA GATGCGCGCG
CTGGTCGAGC AGTTCGATCT CGACCAGTAC ATGAAGACCC TGAACACGCT GTATCGCCAT
GACCAATGA
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| Protein sequence | MVGRQRIDRV RRQYNQWVAN QTLEDYALRF TAKSARRWSA LRVANTALGA ISFLALEAIG
GTITLNYGVT NATAAILVVS VIIFCCGLPI AYHAARCGVD IDLLTRGAGF GYIGSTITSL
IYASFTFIFF AIEAVILAKA LEMCFGLPLA LGYLFSAVVI IPLVTHGITL ISRFQLWTQP
FWILLHILPF AAIAIKSPES FEEWTRFAGA QGDPAGHLDL LLFGTAASVV FALVAQIGEQ
VDFLRFLPRD RRTSKAAWWA AMISAGPGWI VPGAIKLLAG SFLAYFALSH GLDMEDAAEP
SHMYREAFRY VLAQPELALA LTGAFVMLSQ IKINVTNAYA GSIAWSNFFS RLTHSHPGRV
VWLVFNVLVA LLLMEIGVYR ALEQTLALYS NVAIAWVGAL VADLVINRPL GLRPRQMEFK
RAHLYDINPV GVGSMAIATV MSITAFYGVF GPTAKALAPF VALLVAFVTA PAIALLTRGR
FYIARKPKRS WQNLPAIKCC ICEHSFEPED MAHCPAYAGP ICSLCCSLDA RCHDLCKPHA
RFDAQFTDAL GKVLPQRVHA LLNSQVGHYL SVFMVSAGLV GLTLMMIYLQ AAPATDAQQI
LLSEILWKLF FALSIIIGVV TWLFVLARQS RQAAEAETRR QTTLLMQEID AHRQTDAELQ
RAKEVAESAN LAKSRYVVGL SHELRSPLNA ISGYAQLLEQ DASLPPRPRD QIRLMRRSAD
HLSGLIDGLL DISKIEAGRL YLSRDEVRFG EFLDQLVGMF RLQATAKDVD FVFKRPQYLP
PVVYADEKRL RQVLINLLSN AIKFTQEGSV HFIVHYRNPV AELEVRDTGP GIHADDLERI
FAPFERGALG VSQPHTGTGL GLTISKLLAG VMGGDLSVTS TLGQGSTFRV KLLLSEVTNP
TRTRAIRAPI LGYHGPRKTI LITDDDPAQR NLLQELLAPL GFIVLSAPDG YTCVGLAEHC
QPDLFLLDIS MAGMDGWTVA ETLRTNGHHH ARILMVSASA IEAHGAPLAQ PFHDGYLMKP
VDIPRLLEQI GQLLKIEWIY KGETPETPAA TGDMQSPPMQ HVEELIELGK IGYIRGIESK
LDQIDNDYPE SGTFVSQMRA LVEQFDLDQY MKTLNTLYRH DQ
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