Gene RPB_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1247 
Symbol 
ID3909181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1426307 
End bp1426696 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content63% 
IMG OID637883141 
Producthypothetical protein 
Protein accessionYP_484868 
Protein GI86748372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.391441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAA ATAATCGGTC GATTCCCGAG CTGTTCGGCG ATGCGTTCAA TCAGTTCGCC 
AAGCTGATCA GCAACGAGTT CGATCTCGCC CGCGCCGAGA TGGCCGACAA GATCGGCCAG
GTCGGTCGCG CGGTGGCGAT GATGGGCGCG GGCGCGGTGA TCCTGATCCC CGGCCTGGTG
GTGTTGCTGT TCGCGCTCGC GGCCTTGCTG ATCGAGAACG GGTTCTCCGC CTCGGTCGCC
TATCTGATCA CCGGCGGCGG CACGATCGTC GTCGCCGCTG CGCTGATCGG CATCGGCATC
AGCCGGCTGT CGCCCGACTC ATTGAAGCCG AACATGACGA TCGAGCAATT GCAGCGCGAC
AAGGTCGCGG CAAAGGAGAT GGTGCAGTGA
 
Protein sequence
MTPNNRSIPE LFGDAFNQFA KLISNEFDLA RAEMADKIGQ VGRAVAMMGA GAVILIPGLV 
VLLFALAALL IENGFSASVA YLITGGGTIV VAAALIGIGI SRLSPDSLKP NMTIEQLQRD
KVAAKEMVQ