Gene RPB_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1240 
Symbol 
ID3909174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1419324 
End bp1420172 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID637883134 
Productenoyl-CoA hydratase 
Protein accessionYP_484861 
Protein GI86748365 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.220656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCT TCGAGACCCT CGTGGTCGAA CGTCCCGATC CGGCGATCGC GCGGATCGTG 
ATGAACCGGC CGGAAGCGCG CAACGCGCAG AACCTGCAGA TGACCTACGA CCTCAACGCC
GCGTTCGACG ACGCGGTGCA GGACGATGCC GTGAAGGTCA TCATTCTCGC CGGCTCCGGC
CCGCATTTCT CCGCCGGTCA CGACCTGCGC GCCACCACCA AGAACGAAGC CGGCATCGAC
TTCCCGCCGG TCGGCCATTG GGGCGGCTTC CGCGAGCCCG GCGCTCACGG ACGGATGGCG
CGCGAGCAGG AAATTTATCT GCAGATCACG CGGCGCTGGC GCAATCTCGC CAAGCCGACC
ATCGCCGAAG TGCACGGCAA GTGCATCGCC GGCGGGCTGA TGCTGGCCTG GGCCTGCGAC
CTGATCGTCG CCGCCGACAA TGCCGAGTTC TGCGACCCGG TGGTGACGAT GGGCGTCTGC
GGCGTCGAGT GGTTCGTGCA TCCATGGGAG CTCGGCCCGC GCAAGGCCAA GGAACTGCTG
TTCACCGCCG ATAGCTGGAG TGCGCAAGAC GCGCACCGGC TCGGCATGGT CAATCATGTG
GTGGCCGCCG CCGAGCTATC CGCCTTCACC TTGAATCTGG CGCAGCGCAT CGCCGCCAAG
CCGAGCTTCG CGCTGAAGAT GACCAAGGAA GCGGTCAACC GCTCGGTGGA CATTCAGGGT
CAGCCGGCCG CGATCGATCA GGCGTTCGCG CTGCATCAGC TTTGTCACGC ACACAATCTG
CAGGAGTTTG GAATGATCGT CGATCCGTCG GGACTGCATC CGTCGGTGCG CAAGCAAGTG
AAGGTGTAA
 
Protein sequence
MGGFETLVVE RPDPAIARIV MNRPEARNAQ NLQMTYDLNA AFDDAVQDDA VKVIILAGSG 
PHFSAGHDLR ATTKNEAGID FPPVGHWGGF REPGAHGRMA REQEIYLQIT RRWRNLAKPT
IAEVHGKCIA GGLMLAWACD LIVAADNAEF CDPVVTMGVC GVEWFVHPWE LGPRKAKELL
FTADSWSAQD AHRLGMVNHV VAAAELSAFT LNLAQRIAAK PSFALKMTKE AVNRSVDIQG
QPAAIDQAFA LHQLCHAHNL QEFGMIVDPS GLHPSVRKQV KV