Gene RPB_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1236 
Symbol 
ID3909170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1414645 
End bp1415202 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID637883130 
Productpyruvate ferredoxin/flavodoxin oxidoreductase 
Protein accessionYP_484857 
Protein GI86748361 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAT CCCGGATCGA ACTGCGCTTC GGCGGCACCG GCGGGCAGGG GCTGGTGCTC 
AGCGCCAAGC TCTTGGCCGA TGCGCTGGCG CTGGAAGGCC GCCATGTCGC GCAGTCGCAG
ACCTACGAGC CGACCTCGCG CGGCGGCTTC TGCAACGCCG ACCTCGTCGT CGCCAGCGGC
GAGGTCGATT ATCCGCTGCC GATCGCATTC GACCATCTGG TGCTGCTCGA CAGCATCGCC
GTCAAGCCGT CCTGGCCGCG GCTGAAGGCC GGTGCGCTGG TGATCGCCGA CACCCGGCTG
TGCCCGGATT TGCCCGACGG CGACGTCGTG CCGCATCGCT TGCCGCTCAG CCGCACCGCG
ATCGAGCTCG GCAGCGAACG CGTCACCAAC ATCGTTGCGC TCGGCGCGCT GATCGAACTG
ACAGGGATCT GCAAGCCCAA ATCCATCGAG CAGGTGGTGC GCGCGAGTTC GCCGCGCGGC
TTCCTCGATC TCAACCTGGA CGCGCTCGCC GCCGGCTACG CGCTGGCCAA AGCGCCCGTC
GCCGCGGCTG CGTCGTGA
 
Protein sequence
MPKSRIELRF GGTGGQGLVL SAKLLADALA LEGRHVAQSQ TYEPTSRGGF CNADLVVASG 
EVDYPLPIAF DHLVLLDSIA VKPSWPRLKA GALVIADTRL CPDLPDGDVV PHRLPLSRTA
IELGSERVTN IVALGALIEL TGICKPKSIE QVVRASSPRG FLDLNLDALA AGYALAKAPV
AAAAS