Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1235 |
Symbol | |
ID | 3909169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1413819 |
End bp | 1414631 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883129 |
Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
Protein accession | YP_484856 |
Protein GI | 86748360 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGCG ATGCGCCGCA TTTCGACGTC CGCGATTATC TCCGCCAGGA GATGATGCCG CATTTCCTGT GCCCCGGCTG CGGCCACGGC ATGGCGTTGC GCGCGCTGCT CTGGGCGCTG CACGAACTCA AGGTCGACCG CGACAAGCTC GCCGTCGTCT CGGGCATCGG CTGCGCCGGG CGGCTGTCGG CCTATATCGA CGCCAACACC TTCCACACCA CCCACGGCCG GCCGCTGGCC TATGCGACCG GGCTGGCGCT GGCGCGGCCG GACCTGCAAG TCGTGGTGAT CACCGGCGAC GGCGATTGCC TGGCGATCGG CGGCAACCAT CTGATCCACG CCTGCCGGCG CAATCTCAAG CTCACCTGCC TGATGCTCAA CAACGAGATC TACGGCATGA CCGGCGGCCA GGTGTCGCCG ACGACGTCGG AGACAAGGCT GACCACCACG ACGCCGCACG GCAACGCCGA GCCGAATTTC GACGCCTGCG CGCTGGCGAC CGCCGCCGGC GCCGGCTTCG TCGGCCGCGA AATGACGCGC CACGTGCCGA AGCTGAAGGA ACTGATCAAG GACGGGCTGC AGCATCCGGG CTTCGCCTTC ATCGAAGTGC TGTCGGATTG CACCGAAGTC TACGGCCGCA AGAACGACAT GGGCTCGTCG TCCGAAATGG TGCTGCGGCA GAAGAGCGAG ATGCGCCCAA GCGCCTATCG CGACAGCGTC GACGAGCCGT TCCGCTCGAC GGACCTGCCG ACCGGCATTT TGGCTCGCAA CACCCGCCCG GAGTACGGCG CAGCGCTGCG CGCCGCCAAG TAA
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Protein sequence | MFRDAPHFDV RDYLRQEMMP HFLCPGCGHG MALRALLWAL HELKVDRDKL AVVSGIGCAG RLSAYIDANT FHTTHGRPLA YATGLALARP DLQVVVITGD GDCLAIGGNH LIHACRRNLK LTCLMLNNEI YGMTGGQVSP TTSETRLTTT TPHGNAEPNF DACALATAAG AGFVGREMTR HVPKLKELIK DGLQHPGFAF IEVLSDCTEV YGRKNDMGSS SEMVLRQKSE MRPSAYRDSV DEPFRSTDLP TGILARNTRP EYGAALRAAK
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