Gene RPB_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1235 
Symbol 
ID3909169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1413819 
End bp1414631 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID637883129 
Product2-oxoglutarate ferredoxin oxidoreductase subunit beta 
Protein accessionYP_484856 
Protein GI86748360 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCG ATGCGCCGCA TTTCGACGTC CGCGATTATC TCCGCCAGGA GATGATGCCG 
CATTTCCTGT GCCCCGGCTG CGGCCACGGC ATGGCGTTGC GCGCGCTGCT CTGGGCGCTG
CACGAACTCA AGGTCGACCG CGACAAGCTC GCCGTCGTCT CGGGCATCGG CTGCGCCGGG
CGGCTGTCGG CCTATATCGA CGCCAACACC TTCCACACCA CCCACGGCCG GCCGCTGGCC
TATGCGACCG GGCTGGCGCT GGCGCGGCCG GACCTGCAAG TCGTGGTGAT CACCGGCGAC
GGCGATTGCC TGGCGATCGG CGGCAACCAT CTGATCCACG CCTGCCGGCG CAATCTCAAG
CTCACCTGCC TGATGCTCAA CAACGAGATC TACGGCATGA CCGGCGGCCA GGTGTCGCCG
ACGACGTCGG AGACAAGGCT GACCACCACG ACGCCGCACG GCAACGCCGA GCCGAATTTC
GACGCCTGCG CGCTGGCGAC CGCCGCCGGC GCCGGCTTCG TCGGCCGCGA AATGACGCGC
CACGTGCCGA AGCTGAAGGA ACTGATCAAG GACGGGCTGC AGCATCCGGG CTTCGCCTTC
ATCGAAGTGC TGTCGGATTG CACCGAAGTC TACGGCCGCA AGAACGACAT GGGCTCGTCG
TCCGAAATGG TGCTGCGGCA GAAGAGCGAG ATGCGCCCAA GCGCCTATCG CGACAGCGTC
GACGAGCCGT TCCGCTCGAC GGACCTGCCG ACCGGCATTT TGGCTCGCAA CACCCGCCCG
GAGTACGGCG CAGCGCTGCG CGCCGCCAAG TAA
 
Protein sequence
MFRDAPHFDV RDYLRQEMMP HFLCPGCGHG MALRALLWAL HELKVDRDKL AVVSGIGCAG 
RLSAYIDANT FHTTHGRPLA YATGLALARP DLQVVVITGD GDCLAIGGNH LIHACRRNLK
LTCLMLNNEI YGMTGGQVSP TTSETRLTTT TPHGNAEPNF DACALATAAG AGFVGREMTR
HVPKLKELIK DGLQHPGFAF IEVLSDCTEV YGRKNDMGSS SEMVLRQKSE MRPSAYRDSV
DEPFRSTDLP TGILARNTRP EYGAALRAAK