| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1226 |
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| Symbol | |
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| ID | 3910161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1403317 |
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| End bp | 1404927 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883120 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_484847 |
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| Protein GI | 86748351 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.560776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA CGTCGCATTG GCTGCGTTCA GTAGCTGCGT CGAAATTCGC GCTGCCGGCG
CTGGCGCTCG CAGCTTCGCT GACACTGCCC GCGTTTGCCG ATGCCAAGAC CATTCAAGCG
GTGATGCATT CCGATCTGCG CGTCACCGAT CCCGGTCTGA CGACCGCCTA CATCACGCGT
GACCATGGCT ACATGGTTTA CGACACGTTG CTGGCGATGG ACTCCAACTT CAAAGTCCAG
CCGCAGATGG CGGAGTGGAA GGTCTCCGAC GACAAGCTGA CCTACACGTT CACGTTGCGC
GACGGCCTGA AATGGCACGA CGGCAAGCCG GTCACCGCCG AGGATTGCGT CGCGTCGCTG
AAGCGCTGGG GCCAGAAGGA CGGCATGGGC CAGAAGCTGA TGGACTTCAC GGCCAGCCTT
GAGGCTACCG ATGCCAAGAC CATCACGCTG AAGCTGAAGG AGCCCTACGG CCTGGTGCTC
GAATCGATCG GCAAGCCGTC TTCGCTGGTG CCGTTCATGA TGCCGAAGCG TCTGGCCGAA
ACCTCGCCCG ACAAGGCGAT CCCCGAGCAG ATCGGGTCCG GTCCGTTCAA GTTCGTCGCG
GCCGAATTCC AGCCGGGCGT CAAGGCGGTG TACGTCAAGA ACACCGACTA CGTGCCGCGC
AAGGAGGCGC CGAGCTGGAC CTCGGGCGGC AAGGTCGTGA AGGTCGACCG TGTCGAATGG
ATCACCATGC CGGATGCGCA GACCGCGGTG AACGCGCTGC AGTCCGGCGA CATCGATTTC
ATCGAGGCCC CGTCCTTCGA CATGCTGCCG GTGCTGAAGG CCGACAAGGA GCTGACGATT
CAGACGCTCA GTCCGCTCGG CTTCCAGACG CTCGGCCGGA TGAACTTCCT GTATCCGCCG
TTCGACAACC TCAAGGTCCG CCGCGCCGCG TTCCTGGCGT TGAGCCAGAA GCCGGTGCTC
GACGCGCTGG TCGGCAATCC CGATTACTAC ATCGTCTGCG GTGCCGTGTT CGGTTGCGGC
ACACCCTTGG CCTCCGACGT CGGCTCCGAG TCCCTGGTGA AGGGCAACGG CATGGCCGAG
GCCAAGAAGC TGCTCGCCGA GTCCGGCTAT GACGGCACCC CGATCGCGCT GATGGCGCCG
GGCGACGTGG TCTCGCTCAA GGCCCAGCCG ATCGTTGCGG CGCAACTCCT GCGCGAGGCC
GGCTTCAAGG TCGACGTTCA GGCCACCGAC TGGCAGACAG TGGTGACGCG GCGCGCCAGC
CAGAAGCCGC CCGCGGAAGG CGGCTGGAAC ATGTTCTTCA CCAATTGGGC CGGCCCGGAC
ATTCTCAACC CGATCGCCAA CGTCTCGACC GGCGGCCGGG GCAAGAACGG CGGCTGGTTC
GGCTGGCCGG AGGACGCCAA GATCGAAGAG CTGCGCGACA AGTTCGCCCG CTCGACCTCG
CCGGAGGAGC AGAAGAAGCT CGCCGCGGAG ATCCAGAAGG AGGTCTACGA CAAGGTGATC
TACATCCCGC TCGGGCAATA CAAGTCGCCG AGCGTGTGGC GGAAGGATCT GACCGGCGTG
CTCACCGGCC CGGCGACCCC GGTGTTCTGG AACATCGACA AGAAGGAGTA G
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| Protein sequence | MIETSHWLRS VAASKFALPA LALAASLTLP AFADAKTIQA VMHSDLRVTD PGLTTAYITR
DHGYMVYDTL LAMDSNFKVQ PQMAEWKVSD DKLTYTFTLR DGLKWHDGKP VTAEDCVASL
KRWGQKDGMG QKLMDFTASL EATDAKTITL KLKEPYGLVL ESIGKPSSLV PFMMPKRLAE
TSPDKAIPEQ IGSGPFKFVA AEFQPGVKAV YVKNTDYVPR KEAPSWTSGG KVVKVDRVEW
ITMPDAQTAV NALQSGDIDF IEAPSFDMLP VLKADKELTI QTLSPLGFQT LGRMNFLYPP
FDNLKVRRAA FLALSQKPVL DALVGNPDYY IVCGAVFGCG TPLASDVGSE SLVKGNGMAE
AKKLLAESGY DGTPIALMAP GDVVSLKAQP IVAAQLLREA GFKVDVQATD WQTVVTRRAS
QKPPAEGGWN MFFTNWAGPD ILNPIANVST GGRGKNGGWF GWPEDAKIEE LRDKFARSTS
PEEQKKLAAE IQKEVYDKVI YIPLGQYKSP SVWRKDLTGV LTGPATPVFW NIDKKE
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