Gene RPB_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1218 
Symbol 
ID3910153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1392844 
End bp1393953 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID637883112 
Producthypothetical protein 
Protein accessionYP_484839 
Protein GI86748343 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.780645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCA ACCCGATGAA CATCCCCCCG GTCTCGATCG CTGCTGCGAA GGCGGCGCTG 
ATCGAACAAT ACGGCGAGCC GACGCTGCGC AAGCGCGCCT CGATGCTGTG GGGGACGCGC
GGCGTCGGCA AGTCGTCGGT CGTCCACCAG GTCGCCGAGC ACTACAAGGT GCCGCTGGTC
GATCTGCGCC TCACCACGAT CGAGCCGGTC GATATCCGCG GCGCGATCTA CGCCGACGAA
AATCTGGCCA AGACGGTGTG GTTTCCGCCG GAATTCCTGC CTTCGCCCGA CCAGCCCGAG
GGGCTGTTGT TCCTCGATGA ACTGACCGCG GCCGATCAGC GGCTGCAAAT CTCGGCCTAT
TCGCTGATCC TCGATCGCCG CGTCGGCAAC TACCAACTGC CCGACGGCTG GCTGGTGGTC
GCCGCCGGCA ATGCCAGCTT CCACGGCGCG ATCAGCCACG ACATGGGCAC CGCACTCGCC
GACCGCATGT TCCACTTCAA TGTGCAGACC GCGATCGACG CCTTCCTGAG CCACGCCATG
GCACGTGATT TCGCGCCCGA GGTGATGGCC TATCTGAAGA TCCGTCCGGA CAAGCTCGAC
GATACGCAAG CGCAGCTCGC CGGCGATCAT CTGATCGGCG CCAGCCCGCG CGGCTGGGAA
GATATCTCCA ACGTGCTGAA GTCCGGCCTG TCCGATCCCG CCAAGCGGCT GTTCGTGCAG
GGCCGGATCG GCGCCGCCAA TGCGGCGGAG TTCTTCGGCG TGCTGCGCGA GATCAAGGCC
GGCACCGATG TGGTGAAGTT GCTGGCCGCG CGGCCGGGCC CGGAGACCGC CGCGCTGCTG
CCGAAGACGC TCGATGCGCT CTACGGCATG CTGTACGGCC TGCTGGCGGC CTGCACCGAT
CAGCCGACAC TGGCCCGCGC GCTGGAGATC ATCGAGCAAC TGCCCGATAT TCGCGGCAAC
GTCCCGCTGC CGATTCGCGA GGCGCAGACG CTGGCGATGG AACTGTTGAT GCAGCGCGCG
CTGGAGAACG GCCTCGAGGC CGCGATCTTC GACAGTCCGG CCTATGCGCG CTACGGCGAA
CGCCGGCAGA TGGATCTGCA GGATGCCTGA
 
Protein sequence
MHGNPMNIPP VSIAAAKAAL IEQYGEPTLR KRASMLWGTR GVGKSSVVHQ VAEHYKVPLV 
DLRLTTIEPV DIRGAIYADE NLAKTVWFPP EFLPSPDQPE GLLFLDELTA ADQRLQISAY
SLILDRRVGN YQLPDGWLVV AAGNASFHGA ISHDMGTALA DRMFHFNVQT AIDAFLSHAM
ARDFAPEVMA YLKIRPDKLD DTQAQLAGDH LIGASPRGWE DISNVLKSGL SDPAKRLFVQ
GRIGAANAAE FFGVLREIKA GTDVVKLLAA RPGPETAALL PKTLDALYGM LYGLLAACTD
QPTLARALEI IEQLPDIRGN VPLPIREAQT LAMELLMQRA LENGLEAAIF DSPAYARYGE
RRQMDLQDA