Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1218 |
Symbol | |
ID | 3910153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1392844 |
End bp | 1393953 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637883112 |
Product | hypothetical protein |
Protein accession | YP_484839 |
Protein GI | 86748343 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.780645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGGCA ACCCGATGAA CATCCCCCCG GTCTCGATCG CTGCTGCGAA GGCGGCGCTG ATCGAACAAT ACGGCGAGCC GACGCTGCGC AAGCGCGCCT CGATGCTGTG GGGGACGCGC GGCGTCGGCA AGTCGTCGGT CGTCCACCAG GTCGCCGAGC ACTACAAGGT GCCGCTGGTC GATCTGCGCC TCACCACGAT CGAGCCGGTC GATATCCGCG GCGCGATCTA CGCCGACGAA AATCTGGCCA AGACGGTGTG GTTTCCGCCG GAATTCCTGC CTTCGCCCGA CCAGCCCGAG GGGCTGTTGT TCCTCGATGA ACTGACCGCG GCCGATCAGC GGCTGCAAAT CTCGGCCTAT TCGCTGATCC TCGATCGCCG CGTCGGCAAC TACCAACTGC CCGACGGCTG GCTGGTGGTC GCCGCCGGCA ATGCCAGCTT CCACGGCGCG ATCAGCCACG ACATGGGCAC CGCACTCGCC GACCGCATGT TCCACTTCAA TGTGCAGACC GCGATCGACG CCTTCCTGAG CCACGCCATG GCACGTGATT TCGCGCCCGA GGTGATGGCC TATCTGAAGA TCCGTCCGGA CAAGCTCGAC GATACGCAAG CGCAGCTCGC CGGCGATCAT CTGATCGGCG CCAGCCCGCG CGGCTGGGAA GATATCTCCA ACGTGCTGAA GTCCGGCCTG TCCGATCCCG CCAAGCGGCT GTTCGTGCAG GGCCGGATCG GCGCCGCCAA TGCGGCGGAG TTCTTCGGCG TGCTGCGCGA GATCAAGGCC GGCACCGATG TGGTGAAGTT GCTGGCCGCG CGGCCGGGCC CGGAGACCGC CGCGCTGCTG CCGAAGACGC TCGATGCGCT CTACGGCATG CTGTACGGCC TGCTGGCGGC CTGCACCGAT CAGCCGACAC TGGCCCGCGC GCTGGAGATC ATCGAGCAAC TGCCCGATAT TCGCGGCAAC GTCCCGCTGC CGATTCGCGA GGCGCAGACG CTGGCGATGG AACTGTTGAT GCAGCGCGCG CTGGAGAACG GCCTCGAGGC CGCGATCTTC GACAGTCCGG CCTATGCGCG CTACGGCGAA CGCCGGCAGA TGGATCTGCA GGATGCCTGA
|
Protein sequence | MHGNPMNIPP VSIAAAKAAL IEQYGEPTLR KRASMLWGTR GVGKSSVVHQ VAEHYKVPLV DLRLTTIEPV DIRGAIYADE NLAKTVWFPP EFLPSPDQPE GLLFLDELTA ADQRLQISAY SLILDRRVGN YQLPDGWLVV AAGNASFHGA ISHDMGTALA DRMFHFNVQT AIDAFLSHAM ARDFAPEVMA YLKIRPDKLD DTQAQLAGDH LIGASPRGWE DISNVLKSGL SDPAKRLFVQ GRIGAANAAE FFGVLREIKA GTDVVKLLAA RPGPETAALL PKTLDALYGM LYGLLAACTD QPTLARALEI IEQLPDIRGN VPLPIREAQT LAMELLMQRA LENGLEAAIF DSPAYARYGE RRQMDLQDA
|
| |