Gene RPB_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1215 
Symbol 
ID3910150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1388947 
End bp1389792 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID637883109 
Producthypothetical protein 
Protein accessionYP_484836 
Protein GI86748340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.473794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGT GGGTCTCGAT CGGAGCGGCT GTTGCCGTCG TTACTGCGGC CGGCATGGTC 
GCGGGCCTGG CGGCGCCGAA CCGGACGGCG CCGATTGCCG ACCGGTCCGA CGGCGCCAAA
GAGGTCGACG TCGAGTTGAT ACTCGCCGTC GACGTCTCCT ACTCGATGGA TGTCGACGAA
CTCGCGGTGC AGCGCGAGGG CTATGCCGAG GCGCTGCGCT CCCCGGATTT TCTCAAGACG
CTGAAGACCG GGCCGAACGG CCGCATCGCC GTGACCTATT TCGAATGGGC CGCCGCCGGC
GATCAGAAGA TCATCCTCGC CTGGCAGTTG ATCGACGGCC CGGAATCCGC CGACGCGGTC
GCGGCCGAGA TCATGAAAGC GCCGCTGCGG CGGGCGTCGC GCACCTCGAT CTCCGGGGCG
ATCGCTTTCG CGGTGCCGCT GTTCGATCAG AACCCGTATC ACGGCCTGCG CCGCGTCATC
GACATCTCCG GCGACGGCCC CAACAACAAC GGCGAACCGG TGACGCTGGC GCGCGACGCC
GCGGTCGGGA AGGGCATCGT CATCAACGGC CTGCCGATCA TGGTCAAGGA GCCGTCCTAC
TCGACCATGG ATATCGAGAA TCTGGATTAT TACTACGAGG ATTGCGTGAT CGGCGGGCCG
GGCGCGTTCG TGGTGACGAT CAAGGACCGC GCCAAGTTCA AGGAGGCGAT CCACACCAAA
CTGGTGATGG AAGTCGCCGG CCTGCCGCCA CCCGCGCGCA TCGTGCCGGC GGCCGACAAG
GAGCAGACCC CGCGGGTGTC GTGCCTGGCC GGCGAGAAGA TCTGGCAGGA TCGCTGGGGG
CGTTAG
 
Protein sequence
MRWWVSIGAA VAVVTAAGMV AGLAAPNRTA PIADRSDGAK EVDVELILAV DVSYSMDVDE 
LAVQREGYAE ALRSPDFLKT LKTGPNGRIA VTYFEWAAAG DQKIILAWQL IDGPESADAV
AAEIMKAPLR RASRTSISGA IAFAVPLFDQ NPYHGLRRVI DISGDGPNNN GEPVTLARDA
AVGKGIVING LPIMVKEPSY STMDIENLDY YYEDCVIGGP GAFVVTIKDR AKFKEAIHTK
LVMEVAGLPP PARIVPAADK EQTPRVSCLA GEKIWQDRWG R