Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1215 |
Symbol | |
ID | 3910150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1388947 |
End bp | 1389792 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883109 |
Product | hypothetical protein |
Protein accession | YP_484836 |
Protein GI | 86748340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.473794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTGGT GGGTCTCGAT CGGAGCGGCT GTTGCCGTCG TTACTGCGGC CGGCATGGTC GCGGGCCTGG CGGCGCCGAA CCGGACGGCG CCGATTGCCG ACCGGTCCGA CGGCGCCAAA GAGGTCGACG TCGAGTTGAT ACTCGCCGTC GACGTCTCCT ACTCGATGGA TGTCGACGAA CTCGCGGTGC AGCGCGAGGG CTATGCCGAG GCGCTGCGCT CCCCGGATTT TCTCAAGACG CTGAAGACCG GGCCGAACGG CCGCATCGCC GTGACCTATT TCGAATGGGC CGCCGCCGGC GATCAGAAGA TCATCCTCGC CTGGCAGTTG ATCGACGGCC CGGAATCCGC CGACGCGGTC GCGGCCGAGA TCATGAAAGC GCCGCTGCGG CGGGCGTCGC GCACCTCGAT CTCCGGGGCG ATCGCTTTCG CGGTGCCGCT GTTCGATCAG AACCCGTATC ACGGCCTGCG CCGCGTCATC GACATCTCCG GCGACGGCCC CAACAACAAC GGCGAACCGG TGACGCTGGC GCGCGACGCC GCGGTCGGGA AGGGCATCGT CATCAACGGC CTGCCGATCA TGGTCAAGGA GCCGTCCTAC TCGACCATGG ATATCGAGAA TCTGGATTAT TACTACGAGG ATTGCGTGAT CGGCGGGCCG GGCGCGTTCG TGGTGACGAT CAAGGACCGC GCCAAGTTCA AGGAGGCGAT CCACACCAAA CTGGTGATGG AAGTCGCCGG CCTGCCGCCA CCCGCGCGCA TCGTGCCGGC GGCCGACAAG GAGCAGACCC CGCGGGTGTC GTGCCTGGCC GGCGAGAAGA TCTGGCAGGA TCGCTGGGGG CGTTAG
|
Protein sequence | MRWWVSIGAA VAVVTAAGMV AGLAAPNRTA PIADRSDGAK EVDVELILAV DVSYSMDVDE LAVQREGYAE ALRSPDFLKT LKTGPNGRIA VTYFEWAAAG DQKIILAWQL IDGPESADAV AAEIMKAPLR RASRTSISGA IAFAVPLFDQ NPYHGLRRVI DISGDGPNNN GEPVTLARDA AVGKGIVING LPIMVKEPSY STMDIENLDY YYEDCVIGGP GAFVVTIKDR AKFKEAIHTK LVMEVAGLPP PARIVPAADK EQTPRVSCLA GEKIWQDRWG R
|
| |