Gene RPB_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1213 
Symbol 
ID3910148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1387061 
End bp1388260 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID637883107 
Productadenylate/guanylate cyclase 
Protein accessionYP_484834 
Protein GI86748338 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.782915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.51515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCAC AACCATTTCA CGACCTGATC GACTGGCTGA TCGACGGCGC GCGCTCCGAG 
GCCGAGCCGG TCGCCATGAT GACGCGCACC TGCGAGCGGC TGGTCGCGGC CGGGCTGCCG
CTGCACCGTG TCGGCGTCTT CGTCGAAACG CTGCATCCGG ACATCTATGG CTACGGCTTC
GTCTGGCGCG ACGGGCAGGG GATCGTCACC AGCGAAACCA CGGTGGACGT CGAGAGCCTG
GAAGAATATC AGCGCAGTCC GCTGAAGCTG ATGTACGACA GCGGCGGCGA AGTCCGGTTT
CGTCTCGACG ACCCCGCCAG CAGGGCGTAC CCGTTTTTCG ACGATATGCG CGGCGAAGGC
GTCACCGACT ATCTGGCGCT GCCGCTGACT TTCATGGACC GCAGTATCAA CGGCGCCAGC
TTCAGCACGC GACGGCCGGG CGGTTTCAGC GACGACGAAC TGGTCGCGTT GCGGCGGCTC
ACCGGGCCGC TGGCACGGCT GATCGAGGTG ATCAGCCTGC GCGCGATCGC CACGACGCTG
CTCGACACTT ATGTCGGCAA CCGTGCCGGC GCACGCATCC TCGCCGGCCA GATCCGGCGC
GGCCACACCG ACACCATGCG CACGGCGATC TGGCTGTCGG ACCTGCGTGG TTTCACCGCG
CTGTCGGACC GGCTGCCGCC GGAGGTCGTG GTCAAGCTGC TCAACGCTTA CTTCGATTGC
CAGGTCGGAC CGATCCTGCG CAATGGCGGC GAGGTGCTGA AATTCATGGG CGACGGCCTG
CTGGCGGTGT TTCCGATCGC CGCCGACGGC GGCGACGAAG CCGACGTCTG CGCCCGGATG
CTCGCCGCCG CGCATGAATG CCGCGGCACC GTCGCGGCGA TGAACTACAT CGAGGGCAAC
CACATCATCG AGGGCTTCCG TTTCGGCGTC GCGCTGCATG TCGGCTCGGT GCTCTACGGC
AATATCGGCG GCGGCAACCG GCTCGACTTC ACCTGCATCG GGCCCGCCGT CAATCTCGCC
GCCCGGCTGG AGCGGATCGC CGGACGGCTC GGCCGCACCG TCGTCGCCTC GTCGGATTTC
ATCGGCCTGT GCGGCGAGGG CTTCGTCGAA CTCGGCGAGT TCCCGATCGA CGGACTGTCG
CACACCGAGC GGGTCTACGG TCTCGAAGTC GAGACGCTGC AGGCGGCGGA GGGATTGTAG
 
Protein sequence
MQSQPFHDLI DWLIDGARSE AEPVAMMTRT CERLVAAGLP LHRVGVFVET LHPDIYGYGF 
VWRDGQGIVT SETTVDVESL EEYQRSPLKL MYDSGGEVRF RLDDPASRAY PFFDDMRGEG
VTDYLALPLT FMDRSINGAS FSTRRPGGFS DDELVALRRL TGPLARLIEV ISLRAIATTL
LDTYVGNRAG ARILAGQIRR GHTDTMRTAI WLSDLRGFTA LSDRLPPEVV VKLLNAYFDC
QVGPILRNGG EVLKFMGDGL LAVFPIAADG GDEADVCARM LAAAHECRGT VAAMNYIEGN
HIIEGFRFGV ALHVGSVLYG NIGGGNRLDF TCIGPAVNLA ARLERIAGRL GRTVVASSDF
IGLCGEGFVE LGEFPIDGLS HTERVYGLEV ETLQAAEGL