| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1204 |
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| Symbol | |
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| ID | 3910139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1378147 |
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| End bp | 1378923 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883098 |
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| Product | Short-chain dehydrogenase/reductase |
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| Protein accession | YP_484825 |
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| Protein GI | 86748329 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCG ACACCCCGAA GCCACGCGCG CAGGATAGCA ATGCGCAGCG CCGGACCATG
ATTCTGACCG GCGCGAGCCG TGGAATCGGC CATGCCACCG TGATCCGCTT CTCCAGCGCC
GGGTGGCGGG TGATCACCTG TTCGCGCCAT CCGTTCCCGG AGGAATGCCC GTGGGGCGCC
GGCCCCGAGG ATCACATCCA GATCAATCTG GGCGACCGCG CCGACACGCT GCGCGGAATC
GACGAGATCC GTGAGCGGCT CGACGGCGAT CAGCTCCACG CGCTGGTCAA CAACGCCGCG
ATCTCACCGA AGGCAGCCGG CGGCGGCCGG CTCGGCTCGA TCGACACCGA AATGGACACC
TGGGAGCACG TCTTCCACGT CAACTTCTTC GCGCCGATCA TGATGGCGCG GGGGCTGATC
GAGGAACTCA AGGCCGCGAA GGGCTCGGTC GTCAACGTCA CCTCGATCGC GGGCTCGCGG
GTGCATCCGT TCGCCGGCGC CGCCTACGCG ACGTCGAAGG CCGCTCTCGC CGCGCTGACG
CGCGAAATGG CGTCGGATTT CGGCCGCATC GGGGTGCGGG TGAATTCGAT CGCCCCGGGT
GAGATCGACA CCTCGATCCT GTCGCCCGGC ACCGAGAAGA TCGTCGAGGA AGACATCCCG
ATGCGCCGCC TCGGCACGCC GGACGAAGTG GCCAAGATCA TCTACGTGCT GTGCACGGAG
ACGTCGTCCT ATGTGAACGG CGCCGAGATC CACATCAACG GCGGCCAGCA CGTGTAG
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| Protein sequence | MSPDTPKPRA QDSNAQRRTM ILTGASRGIG HATVIRFSSA GWRVITCSRH PFPEECPWGA
GPEDHIQINL GDRADTLRGI DEIRERLDGD QLHALVNNAA ISPKAAGGGR LGSIDTEMDT
WEHVFHVNFF APIMMARGLI EELKAAKGSV VNVTSIAGSR VHPFAGAAYA TSKAALAALT
REMASDFGRI GVRVNSIAPG EIDTSILSPG TEKIVEEDIP MRRLGTPDEV AKIIYVLCTE
TSSYVNGAEI HINGGQHV
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