Gene RPB_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1202 
Symbol 
ID3910137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1377095 
End bp1377769 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content63% 
IMG OID637883096 
Productcarboxymethylenebutenolidase 
Protein accessionYP_484823 
Protein GI86748327 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGA TCATCACCTT CAAGCGTCCC GACGGTCAGG ATGCCAGCGG CTATCTCGCC 
AATGCCGCGC GCGGCAACGC CCCGGGCGTC GTCGTGATTC AGGAATGGTG GGGCCTGTCC
GAACAGATCA AGGGACTGAC TGATCGTTTC GCGCTCGCCG GCTTCGATGC GCTGGCGCCG
GATCTCTACA ACGGCAAGGT GGTGCCCTAT CACGACACGG ACGCCGCTAA CAAAGAGATG
AGCTCACTCG ATTTCATGGA CGCGACCACA CAGACCGTGC GCGGCGCGGC CGGCTATCTG
GCACGCAACG GCGCCAAGGT AGGTCTCACC GGATTCTGTC TCGGCGGCGC CGTCACGGTG
ATCGGCGCGT GCAAAATCCC CGAACTGAGT GCAGCGGTTG TGTTCTACGG CATCCCCCCG
GAACAGGCGG CGAAACCGTC CGACGTCCGC GTGCCGATGC AGGGCCACTT CGCCAATCGC
GACGATTGGT GCACGCCGCA AGTGGTCGAC GCGTTCGAGA AAGGGCTGAA AGAGGCGGGA
AAGAGCGCGG AATTCTTCCG TTACGATGCC GATCACGCCT TCGTCAACGA ACAGCGCGCC
GCAGTGCACG ATCGAGAGGC CGCGGAACTC GCGTGGTCGC GCGCCACGGC ATTCTTTGGA
AAGCATCTCG GCTGA
 
Protein sequence
MGTIITFKRP DGQDASGYLA NAARGNAPGV VVIQEWWGLS EQIKGLTDRF ALAGFDALAP 
DLYNGKVVPY HDTDAANKEM SSLDFMDATT QTVRGAAGYL ARNGAKVGLT GFCLGGAVTV
IGACKIPELS AAVVFYGIPP EQAAKPSDVR VPMQGHFANR DDWCTPQVVD AFEKGLKEAG
KSAEFFRYDA DHAFVNEQRA AVHDREAAEL AWSRATAFFG KHLG