| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1201 |
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| Symbol | |
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| ID | 3910136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1374860 |
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| End bp | 1376929 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637883095 |
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| Product | cytochrome c1 |
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| Protein accession | YP_484822 |
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| Protein GI | 86748326 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex
[COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAC CATCGACCTA TCAGCCGCAG AGCCCCTTCA TGAAGTGGCT CGAGCAACGC
CTGCCGATCG CCGGGCTGGT TCATTCGTCG TTCATTGCCT ACCCCACGCC GCGCAACCTG
AACTACTGGT GGACGTTCGG CGCCATTCTC TCGATGATGC TGGCGGTGCA GATCATCACC
GGCATCGTGC TGGCGATGCA CTACACGCCG CACGTCGACT TCGCCTTCGA CTCGGTCGAG
CGGATCGTTC GCGACGTCAA CTACGGCTGG CTGCTGCGCA ACACCCACGC GGCCGGCGCG
TCGATGTTCT TCATCGCGGT CTACATCCAC ATGTTCCGCG GCCTGTATTA CGGGTCGTAC
AAGGCGCCGC GTGAAGTGCT CTGGATCCTC GGCGTGATCA TCTACCTGCT TATGATGGCG
ACCGGCTTCA TGGGCTATGT GCTTCCCTGG GGCCAGATGA GCTTCTGGGG CGCCACCGTG
ATCACCAACC TGTTCTCGGC GGTCCCGTTC GTCGGCGACA GCATCGTGAC CTTGCTGTGG
GGCGGCTATT CGGTCGGCAA CCCGACCCTG AACCGGTTCT TCTCGCTGCA CTATCTGCTG
CCCTTCGTGA TTGCCGGCGT GGTCGTGCTG CACGTCTGGG CGTTGCACGT CACCGGTCAG
AACAACCCGA CCGGCGTCGA GCCGAAGACC GAGAAGGACA CGGTCGCGTT CACGCCCTAC
GCGACGATGA AGGACGTGTT CGGCATGTCC TGCTTCCTGC TGTTCTTTTC CTGGTTCATT
TTCTACATGC CGAACTATCT CGGTGAGGCC GACAACTACA TTCCGGCGAA TCCGGGCGTG
ACGCCGCCGC ATATCGTTCC GGAATGGTAC TACCTGCCGT TCTACGCGAT CCTGCGGTCG
ATCCCGAACA AGCTGATGGG CGTCGTGGCG ATGTTCGGCG CCATCATCGT GCTGCTGTTC
CTGCCCTGGC TCGACAGCGC CAAGGTGCGC TCGTCGCGCT ACCGGCCGCT GGCGAAGCGG
TTCTTCTGGG GCTTCGTGGT GGTCTGCATC ATGCTCGGAT GGCTCGGCTC GAAGCCGGCG
GAGGGCATCT ACACGGTCCT CGCCCGCGTC TTCACCTTCG CCTATTTCGC CTACTTCCTG
ATCGTGTTGC CGCTACTGTC CAGGGTCGAG AAGACGCTGC CGCTGCCGAA CTCGATCTCG
GAGGACGTGC TGAGCAAGGG CAAGACGGCG GGAGCAACCG CGGCGAGCCT GCTCGCCCTG
GTGATGGCCG GGACGCTGAT GTTCGGCGGG GTGCAGAGCG CCAAGGCGGC GGAAGGCGGC
GAGAGTCCGC CGTCGCTGGA GTGGAGCTTT GCCGGCCCGT TCGGCACCTA CGATCGCCCC
CAATTGCAGC GCGGCTTCAA GATCTACAAG GAGGTGTGCT CCGCCTGTCA CTCGCTGAAG
TTGCTGCAGT ATCGCAACCT CGCCGAGCCG GGTGGACCGG GCTTCACGAT CGAACAGGCC
AAGGCGATCG CCGCCGAAGC CTCGATCAAG GACGGCCCGA ACGACGCCGG CGAAATGTTC
GAACGCCCCG GCCGGCTCGC CGACACCTTC CATTCGCCGT TCCCGAACGA GCAGGCGGCG
CGCTCGGCCA ATGGCGGTGC GGTTCCGCCG GACATGTCGC TGCTCGCCAA GGCGCGTTCC
TATCCGCGTG GCTTCCCGCA GTTCGTGTTC GACTTCTTCA CCCAGTTCCA GGAGCAGGGC
CCGAACTACA TCGATGCGCT GCTTCAGGGT TATCAGGACA CGCCGCCGGA GGGCTTCACG
CTGCCGGACG GGGCTTACTA CAACAAGTGG TATCCGGGCC ATTCGATCAA AATGCCGCCG
CCGATTTCGG ACGGTCAGGT GAGCTTCGAC GACGGCAGCC CGGAGACCGT GCCGCAATAT
GCCAAGGACG TCACGGCTTT CCTGATGTGG GCTGCCGAGC CGCATCTCGA AGCCCGCAAG
CGCCTCGGTC TGCAGGTCAT GATCTTCCTG ATCATCCTCA GCGGCCTGCT GTACTTCACC
AAGCGCAAGA TCTGGTCGAA CGTGCACTGA
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| Protein sequence | MSGPSTYQPQ SPFMKWLEQR LPIAGLVHSS FIAYPTPRNL NYWWTFGAIL SMMLAVQIIT
GIVLAMHYTP HVDFAFDSVE RIVRDVNYGW LLRNTHAAGA SMFFIAVYIH MFRGLYYGSY
KAPREVLWIL GVIIYLLMMA TGFMGYVLPW GQMSFWGATV ITNLFSAVPF VGDSIVTLLW
GGYSVGNPTL NRFFSLHYLL PFVIAGVVVL HVWALHVTGQ NNPTGVEPKT EKDTVAFTPY
ATMKDVFGMS CFLLFFSWFI FYMPNYLGEA DNYIPANPGV TPPHIVPEWY YLPFYAILRS
IPNKLMGVVA MFGAIIVLLF LPWLDSAKVR SSRYRPLAKR FFWGFVVVCI MLGWLGSKPA
EGIYTVLARV FTFAYFAYFL IVLPLLSRVE KTLPLPNSIS EDVLSKGKTA GATAASLLAL
VMAGTLMFGG VQSAKAAEGG ESPPSLEWSF AGPFGTYDRP QLQRGFKIYK EVCSACHSLK
LLQYRNLAEP GGPGFTIEQA KAIAAEASIK DGPNDAGEMF ERPGRLADTF HSPFPNEQAA
RSANGGAVPP DMSLLAKARS YPRGFPQFVF DFFTQFQEQG PNYIDALLQG YQDTPPEGFT
LPDGAYYNKW YPGHSIKMPP PISDGQVSFD DGSPETVPQY AKDVTAFLMW AAEPHLEARK
RLGLQVMIFL IILSGLLYFT KRKIWSNVH
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