Gene RPB_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1193 
Symbol 
ID3910128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1369668 
End bp1370279 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID637883087 
Producthypothetical protein 
Protein accessionYP_484814 
Protein GI86748318 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.626862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.422003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC AAGGGCAGAG CTTGAACCGC AGCCTCGACG GATTGACGGA AGCCGCGCGC 
GATGCGGCCG GCAAAGCCGC AGCGGGCAAG GGGCTGCCGC CGGTGCATCT GTGGAACCCG
CCGTTCTGCG GCGATCTCGA CATGCGCATC GCCGGCGATG GAACCTGGTT CTATCTCGGC
ACGCCGATCG GGCGGCCGGC GCTTGTGCGG CTGTTCTCCA CCATCCTGAA GCGGGAGGAC
GGCAAGCACT TCCTGGTGAC GCCGGTCGAG AAGGTCGGAA TCAAGGTCGA CGACGCACCG
TTCCTCGCGG TCGAGATGGT GAACGACCAA GATTCGCGCG GCCCCTTGCT GCGCTTCCGC
ACCAATGTCG ACGACTGGGT CGATTGCGAC GCCGATCATC GGCTGCGGTT CGAAGTCGCG
GATGACGGCG GGACGATGCC CTATCTCCAC GTTCGCGCCG ACCTCTGGGC CAAGGTGACG
CGGGCGTTGT ATTACGATCT GGTTGACATC GGCGAGGAGC GGGTGGTCGA TGGTCGTCCG
AAGTTTGGAA TTGCTTCCGG CGGCGCATTC TTCGCGATGG CCGACGCGGA GCAGATGAGG
GAAGCACTTT GA
 
Protein sequence
MAKQGQSLNR SLDGLTEAAR DAAGKAAAGK GLPPVHLWNP PFCGDLDMRI AGDGTWFYLG 
TPIGRPALVR LFSTILKRED GKHFLVTPVE KVGIKVDDAP FLAVEMVNDQ DSRGPLLRFR
TNVDDWVDCD ADHRLRFEVA DDGGTMPYLH VRADLWAKVT RALYYDLVDI GEERVVDGRP
KFGIASGGAF FAMADAEQMR EAL