Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1193 |
Symbol | |
ID | 3910128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1369668 |
End bp | 1370279 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883087 |
Product | hypothetical protein |
Protein accession | YP_484814 |
Protein GI | 86748318 |
COG category | [S] Function unknown |
COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.626862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.422003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGC AAGGGCAGAG CTTGAACCGC AGCCTCGACG GATTGACGGA AGCCGCGCGC GATGCGGCCG GCAAAGCCGC AGCGGGCAAG GGGCTGCCGC CGGTGCATCT GTGGAACCCG CCGTTCTGCG GCGATCTCGA CATGCGCATC GCCGGCGATG GAACCTGGTT CTATCTCGGC ACGCCGATCG GGCGGCCGGC GCTTGTGCGG CTGTTCTCCA CCATCCTGAA GCGGGAGGAC GGCAAGCACT TCCTGGTGAC GCCGGTCGAG AAGGTCGGAA TCAAGGTCGA CGACGCACCG TTCCTCGCGG TCGAGATGGT GAACGACCAA GATTCGCGCG GCCCCTTGCT GCGCTTCCGC ACCAATGTCG ACGACTGGGT CGATTGCGAC GCCGATCATC GGCTGCGGTT CGAAGTCGCG GATGACGGCG GGACGATGCC CTATCTCCAC GTTCGCGCCG ACCTCTGGGC CAAGGTGACG CGGGCGTTGT ATTACGATCT GGTTGACATC GGCGAGGAGC GGGTGGTCGA TGGTCGTCCG AAGTTTGGAA TTGCTTCCGG CGGCGCATTC TTCGCGATGG CCGACGCGGA GCAGATGAGG GAAGCACTTT GA
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Protein sequence | MAKQGQSLNR SLDGLTEAAR DAAGKAAAGK GLPPVHLWNP PFCGDLDMRI AGDGTWFYLG TPIGRPALVR LFSTILKRED GKHFLVTPVE KVGIKVDDAP FLAVEMVNDQ DSRGPLLRFR TNVDDWVDCD ADHRLRFEVA DDGGTMPYLH VRADLWAKVT RALYYDLVDI GEERVVDGRP KFGIASGGAF FAMADAEQMR EAL
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