| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1187 |
|---|
| Symbol | |
|---|
| ID | 3910122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1361344 |
|---|
| End bp | 1361739 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637883081 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484808 |
|---|
| Protein GI | 86748312 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5496] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.238156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAC GCGATGTAAT CTCTGTCGGC ATGACCGCCG AGCGGCAGAT CGTTGTGACG
CCGGAGCAGA CGGTGCAGCA TTTCGTGCCG TATATGCCGG CGGTGTTCGC CACTCCGCTG
ATGATCCTGG AGATGGAAAT GGCCTCGGGC GAGGCCGTGC ATCCGGCGTT GCCGCAGGGC
TGGGTGACGG TCGGCACCGG CGTCGACATC CGCCATCTGA CGCCGGCGCT GGTCGGCCAT
GCGGTGCGGA CGGTGTCGAA AGTCACGGCG GTCGAACAGC GCACGGTGAG CTTCGCGGTC
GCCTGCTGGG TCGGCGCGCG CAAGATCGGC GACGGCAAAC ACATCCGTGG CCTGATCGAC
GTCGAAGCTT TCACCAGCCG CTTCAAGGAT TGGTAG
|
|---|
| Protein sequence | MDARDVISVG MTAERQIVVT PEQTVQHFVP YMPAVFATPL MILEMEMASG EAVHPALPQG
WVTVGTGVDI RHLTPALVGH AVRTVSKVTA VEQRTVSFAV ACWVGARKIG DGKHIRGLID
VEAFTSRFKD W
|
|---|
| |