| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1183 |
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| Symbol | |
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| ID | 3910118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1356056 |
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| End bp | 1357528 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883077 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_484804 |
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| Protein GI | 86748308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0893213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAA TCTCGACCAT TTTCATCGCC ATCTGCATGG CGCTGATCTC CGCGTCGCTG
GGCGCGGTGG TGTATGCGCT CGCCGGCTTC AATGCGGTCG AATCCGCGAT CGTGGCGCTG
GCGACGCTGA GCCTGTTCAT TCTGTACAAT GCCGTCTCGA TCCGGCTGCG CGACCGCTCC
GACGCCGGTC ACCAGATCGC CGATCTGTCG CGCGGCACCG CGGATCTCGC CCGCCAGATC
GCCGAATTCG GCCGCCGGCT CGCTGCGGTC GAAGGCAAAG TGATGGCCGC CAATGCGGCC
AGCCAGGACC GCACCCAGGT CGCCATGAAC GAGATCGGCG AACTCGGGCT GCTGGTCAAG
CAGCTCGCCG CCTCGGTCGC CACCCACGAA GACATGCTGA ATTCCGCCGC GACGGGCGCC
GCACCGCGCC GGCCGCCGAT GCTCGATCCG GAAGCCCGCG TCGAGGATCA GCAGACGGCC
CAGCCCGCCG CCGAGCCGCT CGCCCTGACC GAACTGGTCT CGGCCACCGT CACCGCCCTG
CCGGCAACGC CGAAGCCGGC GCGTGATCCG GCGCAGGTTC TGGTCGCGGT GAAAACCGCG
ATCGAGACCG GCCGGCTCGA CATCTATCTG CAACCGCTGG TGAGCCTACC GCAACGCAAG
GTGCGGTTCT ACGAGATCGT GACGCGGCTG CGCGACGGCA ACGACCAGAT CCTCGCCGCC
GGCGAATTTC TCACCGTCGC CGAGACCGCC GGGCTGATGG GCCGGATCGA CCATGCGGTG
ATGCTGCGCG CCGTCCAGGT GCTGCGGCGG CTGATGGTGC GCAACAAGGA CGTCGGCGTG
TTCGTCAATA TCGCCGCCGC GACCCTGTCG GATGCCGAAT CGTTCGCCCA GTGCCTCGAT
TTTCTCGAGG CCAACAAGGC GCTGGCGCCG TCCTTCGTGC TGGAGTTCAA GCAGAGCACG
CTGCGCAACC TCGGGCCGCT CGAAACCGAG CACCTCGCGG CGCTGGCGCA ACGCGGCTTC
CGGTTCTCGA TCGACCACGT CACCGATCTG CGGTTCGAGC CGCGCGACCT CGCCGACCGC
GGCGTCCGCT TCATCAAGGT TCCGGCGGCG CTGCTGCTCG ACCAGCGCGA GCATCCGGTC
GCCGACATCC ACCCCGCCGA TCTGTCCGAC CTGCTCGGCC GGTTCGGCAT CGATCTGATC
GCCGAGCGGA TCGAGGGCGA GCGCGCGGTG GTCGACCTGC TTGACTACGA TGTGCGGTTT
GGGCAGGGGT TCTTGTTCGC AGCGCCCCGT CCGCTGCGCC CCGAGACCGC CCCATCGCCT
GCGCCCCCTA CTCCCGGCGA CAAGGCCAAG CAGGACATCG CCCCTCCGTA TGATCCAGGC
TCCTCCCCGA AGGGCGAACC CGCCCGGATC GATCCGCCGC GCGCCGCGAC CGGCCTCGCG
GCGCTCGCGC GCCGTGCCGT CGGCCCGGCC TGA
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| Protein sequence | MIRISTIFIA ICMALISASL GAVVYALAGF NAVESAIVAL ATLSLFILYN AVSIRLRDRS
DAGHQIADLS RGTADLARQI AEFGRRLAAV EGKVMAANAA SQDRTQVAMN EIGELGLLVK
QLAASVATHE DMLNSAATGA APRRPPMLDP EARVEDQQTA QPAAEPLALT ELVSATVTAL
PATPKPARDP AQVLVAVKTA IETGRLDIYL QPLVSLPQRK VRFYEIVTRL RDGNDQILAA
GEFLTVAETA GLMGRIDHAV MLRAVQVLRR LMVRNKDVGV FVNIAAATLS DAESFAQCLD
FLEANKALAP SFVLEFKQST LRNLGPLETE HLAALAQRGF RFSIDHVTDL RFEPRDLADR
GVRFIKVPAA LLLDQREHPV ADIHPADLSD LLGRFGIDLI AERIEGERAV VDLLDYDVRF
GQGFLFAAPR PLRPETAPSP APPTPGDKAK QDIAPPYDPG SSPKGEPARI DPPRAATGLA
ALARRAVGPA
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