| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1182 |
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| Symbol | |
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| ID | 3910117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1355189 |
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| End bp | 1356043 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883076 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_484803 |
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| Protein GI | 86748307 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0786523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC TGCGTTTCGT CGAGCACCTG CGCGAGCTGG TGGGATCGGT CGATGTCGTG
CTGAGCGACA TCTGGGGCGT CGTGCATAAC GGCATGGAAT CGTTCCCCGA GGCTTGCGAC
GCGCTGCGCA CCGCGCGCCG GGAAGGCCGT ACCGTGGTGC TGATCACCAA CGCGCCGCGC
CCGGCGGATT CGGTGCAGCG GCAGCTGCGC AAGCTGGACG TGCCCGACGA TTGCTACGAC
GCCATCGTGT CGTCCGGCGA CCTCACCCGC GGCTACGTCG CCGAGCATCC CGGCCAGTCG
GTGTTCTGGC TCGGCCCGGA TCGCGACAAT GCGATCTATC GCGGCCTCGA CGCGATGCTG
ACGCCGCTGG ACAAGGCCGA CTACATCATC TGCACCGGCC CGTTCGACGA CGAGACCGAA
TCCGCCGAGG ACTATCGCGC GATGATGGGC GAGGCGCTGG CGCGCAAGCT GACGCTGGTC
TGCGCCAATC CCGACATCGT GGTCGAGCGT GGCGACCGGC TGATCTACTG CGCCGGCGCG
ATCGCCGAAC TGTATCGCGA GCTCGGTGGC GAGGTGATCT TCTACGGCAA GCCGCACCGG
CCGATCTACG ACCGCGCGAT GGCGCTCGCG CGCGGACTCC GCGGCGCCGA GACGCCGCTT
CCGCGCGTGC TGGCGATCGG CGATTCCGTC CGCACCGACC TCGCCGGCGC GCAGGCCTAC
GGCATCGATC TGTTGTTCGT CACCCGCGGC ATCCATGCCG ATGCCTTCGA GGGCATCGAC
CGGCTCGATG CTGCCGCCGT CGACGAATTG TTCGGCCACC CGCCGCTGGC GCTGACCCGC
GAGCTGCGGT GGTAG
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| Protein sequence | MTTLRFVEHL RELVGSVDVV LSDIWGVVHN GMESFPEACD ALRTARREGR TVVLITNAPR
PADSVQRQLR KLDVPDDCYD AIVSSGDLTR GYVAEHPGQS VFWLGPDRDN AIYRGLDAML
TPLDKADYII CTGPFDDETE SAEDYRAMMG EALARKLTLV CANPDIVVER GDRLIYCAGA
IAELYRELGG EVIFYGKPHR PIYDRAMALA RGLRGAETPL PRVLAIGDSV RTDLAGAQAY
GIDLLFVTRG IHADAFEGID RLDAAAVDEL FGHPPLALTR ELRW
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