Gene RPB_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1181 
Symbol 
ID3910116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1354604 
End bp1354999 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content59% 
IMG OID637883075 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_484802 
Protein GI86748306 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.125402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTG ATTTGTCAAT GTCGGTCCTG GTGGTGGACG ACTACAGCAC CATGATCCGG 
ATCATTCGTA ATCTTCTGAA GCAGCTCGGC TTCGAGCATA TCGACGACGC CAGCGACGGC
TCGGCTGCGC TCGAGAAGAT GCGGGTCAAG AAGTACGGCC TGGTGATCTC GGACTGGAAC
ATGGAGCCGA TGACCGGCTA CGACCTCTTG AAGGAAGTCC GCGCCGATCC CAATCTGTCG
CAGACGCCGT TCATCATGAT CACGGCGGAG TCCAAGACCG AGAACGTGAT CGCCGCCAAG
CGGGCGGGCG TGAACAATTA CATCGTCAAG CCGTTCAACG CGGCGACGCT GAAGACCAAG
ATCGACGCGG TGTTCCCGGA TCACGTCGCG GCGTAA
 
Protein sequence
MAVDLSMSVL VVDDYSTMIR IIRNLLKQLG FEHIDDASDG SAALEKMRVK KYGLVISDWN 
MEPMTGYDLL KEVRADPNLS QTPFIMITAE SKTENVIAAK RAGVNNYIVK PFNAATLKTK
IDAVFPDHVA A