| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1180 |
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| Symbol | |
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| ID | 3910115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1353424 |
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| End bp | 1354281 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883074 |
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| Product | hypothetical protein |
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| Protein accession | YP_484801 |
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| Protein GI | 86748305 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.573551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.143297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATC GCCACGCCTT TCACGCCGGC AATTTCGCCG ATGTCATCAA GCACATCGTG
CTGGCCCGGA TCCTCACTTA TCTGCAGGAG AAGCCGGCGC CGTTTCGGGT GGTCGACAGC
CATGCCGGCG CCGGGCTCTA CGACCTCACC AGCGACGAGG CCCGCCGCGG CGGCGAATGG
GTCACCGGGA TCGCCCGGGT GATGCAGGCG CGGTTCAGCG ACGAGGCCGG CGAACTGATC
AGGCCCTATC TCGACATCAT CCGCGCCTTC AACCCGCAAC GCGACCTGAC CGCCTATCCC
GGATCGCCGC TGATCGCCCG CGCCCTGCTG CGCCCGCAGG ACAGTATGGT CGCCAGCGAA
TTGGAGCCGC TGGCGCGCAA ACAGCTGATC AATGCGCTGC GCCGCGACAC CCAGGCGCGG
GTGGTCGATC TCGACGGCTG GCAGGCGCTG ACCGCGTTCG TGCCGCCGAA AGAACGCCGC
GGCCTGGTGC TGATCGATCC GTCCTTCGAA AAGAAGGACG AATTCGAGCG ATTGGCGCAG
GGTTTCAGCA CCGCTTACGG GAAATGGCCG ACGGGCATCT ATCAGTTGTG GTATCCGGTG
AAGAACCGAC GCGCCACCGA CGCGCTGGCC GACCGCGTTG CAACCGTTGC CGCAGCCGGC
GGCGACGGCA AGTGTCTGCG GCTGGAATTC AGCGTCGCAC CGCAACAGCC GGACGGCGCG
CTGACCTCGA CCGGACTGCT GGTGGTGAAT CCGCCATGGA CGCTGGTGTC GGATTTGAGA
GTCATCCTTC CTGAGCTGGA AAGACCTCTC GGCCAAGGGG GCGTCAGCCG TTATCGGCTC
GAGCTACCTA AGCCCTGA
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| Protein sequence | MNYRHAFHAG NFADVIKHIV LARILTYLQE KPAPFRVVDS HAGAGLYDLT SDEARRGGEW
VTGIARVMQA RFSDEAGELI RPYLDIIRAF NPQRDLTAYP GSPLIARALL RPQDSMVASE
LEPLARKQLI NALRRDTQAR VVDLDGWQAL TAFVPPKERR GLVLIDPSFE KKDEFERLAQ
GFSTAYGKWP TGIYQLWYPV KNRRATDALA DRVATVAAAG GDGKCLRLEF SVAPQQPDGA
LTSTGLLVVN PPWTLVSDLR VILPELERPL GQGGVSRYRL ELPKP
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