Gene RPB_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1164 
Symbol 
ID3910099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1333924 
End bp1334850 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID637883058 
Producthypothetical protein 
Protein accessionYP_484785 
Protein GI86748289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0488894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.160147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCAA CGGCGAGGTT GCGGCGCGGC ACGATTGCGG CCGGCGTTGC CCTCGAACCT 
TTCGAAACGG ACCCGATGGC GCGTAGATTC AACGCTCCCT ATCACATGGA GCCCGTCTCG
CGCCTCGCCG TCTGGGCGCG CTACGTCGCG GTGTTCGCCG CGATCACCGC GGTGGTCTCG
ACGCTGCTGG TGCGGTTCGA CTTCCTCGAA GTGCGGCCGG CGATGGCGAC GTTCTTCGGC
GCGCTGGCAC TCGCCGGGCT GTCGATCCTG CTGGCGCTGG CCGGCTTCGC GGCGATCTGG
CAGAACGGCT CGCGCGGCAT GGCGCGGATC CTGCTGGCGC TGCTGATCGA TGTGCTGATC
CTCGCCTATC CGTCCTATCT CGGCTGGCAG TATCGCACGC TGCCGGCGAT CCACGACATC
ACCACCGACC CGATCGACCC GCCGAAATTC GAGACGCTGG CCCGGCTGCG CACCAGCGAC
GGCGCCAACT CCGCGGTCTA TGCCGGCCTC TACTCCGCCG AGCTGCAGCG CGACGCCTAT
CCGGGGATCG AGACCGTGCA GATCGACCTG CCGGTGAACC GCGCCTACGA GCTGACGCTC
AACCTGGTCA ACAGGCGCAA ATGGCGCGTG GTCGACGCGC GCCCGCCGCA ACTGCCGCGC
CGCGAGGGCC ATATCGAAGC GGTGGCGCGC ACCGCGGTGA TGGGCCTGCC CGAAGACGTC
GCGATCCGCA TCCTGCCGGA CGGCGACGGC GCCCGCATCG ACATCCGCTC CGCCTCGCGC
TTCTTCAAGA GCGACCTCGG CAGCAACGCC GCGCGCATCG CCAAGCTCAG CGAAGCCATC
ACCAGCGCCG CCGAGAACGC GCCCACACCG AAGCCCGAAC CGGCGCCGAA GCAGCCGGCG
AAGGGCAAGG GGCAACCGAA GAAGTAG
 
Protein sequence
MVSTARLRRG TIAAGVALEP FETDPMARRF NAPYHMEPVS RLAVWARYVA VFAAITAVVS 
TLLVRFDFLE VRPAMATFFG ALALAGLSIL LALAGFAAIW QNGSRGMARI LLALLIDVLI
LAYPSYLGWQ YRTLPAIHDI TTDPIDPPKF ETLARLRTSD GANSAVYAGL YSAELQRDAY
PGIETVQIDL PVNRAYELTL NLVNRRKWRV VDARPPQLPR REGHIEAVAR TAVMGLPEDV
AIRILPDGDG ARIDIRSASR FFKSDLGSNA ARIAKLSEAI TSAAENAPTP KPEPAPKQPA
KGKGQPKK