Gene RPB_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1163 
Symbol 
ID3910098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1332753 
End bp1333685 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content68% 
IMG OID637883057 
ProductBeta-lactamase-like 
Protein accessionYP_484784 
Protein GI86748288 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0506017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.1623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCAGCGCTGC CTCCGACGAC GTCCCGTTCA ATCGCGACTT CCCGCTGCAG 
GCCGGCGTGG TCGAGGAGGT TCGCCCCGGG CTGCGCCGCG TGCTCTGCAA CAACCCGTCG
CCGTTCACCT TCACCGGCAC GGTCAGCTAC ATCATCGGCA CCGGCAAGGT CGCGATCGTC
GATCCCGGCC CGGACAGCGA GGCCCACGCG CAGGCGCTGA TCGACGCAGT GAAGGGCGAG
ACCGTCACCC ACATTCTCGT CACCCACACG CATAAGGACC ATTCGCCCGG CACGCCGCGG
CTGAAGGCCC TGACCGGCGC CACCGTCTAT GCCGAAGGCC CGCACCGCGC CTCGCGGCCG
TATTTCGAGA GCGAGACGGT GTCGACCGAA TCCGGCGCCG ACCGCGCGTT CCGGCCCGAC
GTGACGATCC GCGACGGCGA CGTGATCGAG GGCGACGGCT GGGCGGTGGA AGCGGTGGCG
ACGCCCGGCC ACACCGCCAA CCACATGGCG TTCGCCTGGA AGGAGCGCGA CGCGATCTTC
GTCGGCGATC ACATCATGGG CTGGTCGACC TCGATCGTGG CGCCGCCCGA TGGCTCGATG
GTCGACTACA TGGAGTCGCT CGACCGGCTG ATGGCGCGCG ACGAGCAACT GTATCTGTCG
GGGCATGGCG CCGAGATCCT CGAGGGCCCG CGCTATTCGC GCTTCCTCAA GCGCCACCGC
CAGGCCCGCG AAGCCTCGAT CCTGCATCGC CTCGCCAAGG GCGAGACCGA CATCCCGACC
ATGGTCCGCG CCATCTATAT CGGCATCGAC CCGCGCCTGA TCGGCGCCGC CGGCTATTCG
GTGCTGGCGC ATCTCGAAGA TTTGGTGATC CGCGGCGTCG TCACCACCGA CGGCGATCCG
CTGATCGGCG GGCGCTATCG GCTGGCGAAG TAA
 
Protein sequence
MNDASAASDD VPFNRDFPLQ AGVVEEVRPG LRRVLCNNPS PFTFTGTVSY IIGTGKVAIV 
DPGPDSEAHA QALIDAVKGE TVTHILVTHT HKDHSPGTPR LKALTGATVY AEGPHRASRP
YFESETVSTE SGADRAFRPD VTIRDGDVIE GDGWAVEAVA TPGHTANHMA FAWKERDAIF
VGDHIMGWST SIVAPPDGSM VDYMESLDRL MARDEQLYLS GHGAEILEGP RYSRFLKRHR
QAREASILHR LAKGETDIPT MVRAIYIGID PRLIGAAGYS VLAHLEDLVI RGVVTTDGDP
LIGGRYRLAK