Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1152 |
Symbol | |
ID | 3909240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1323395 |
End bp | 1324642 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637883046 |
Product | UreA/short-chain amide ABC transporter |
Protein accession | YP_484773 |
Protein GI | 86748277 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.471291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.323569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCT ATCGGACGAA TGCGACCAGG CGGCTGGCGG CGCTCGCGCT CTGTGCGGGC CTCGGCATTT CGGGTCTCGG CATCGGTGCA GCGACGGCGC AACAGGCCGA CAATTCGCCG GTGCGGATCG GCGTGCTCAC CGACATGTCG GGCCTGTTCG CCGACATCTC CGGTCCGGGC GCGGTCACGG CGGTGAAGAT GGCGGTCGAC GATTTCGGCG GCAAGGTGCT CGGCCGGCCG ATCGAGGTGC TGTCCGCCGA TCACCAGAAC AAGGCCGATG TCGGCGTCTC GCTGGCGCGC GAATGGATCG ACGAGAAGAA CGTGGCGATG CTCGCCGATC TGATGAACTC GTCGGTCGCG CTCGGCGTCA TGGAACTGAC CAAGGCCAAG GACCGCATCG CCATCGTCAA CGGCGCGTCG ACCTCGGTGA TTACCAACGA GAAATGCACG CCGAACAGCA TTCACTACAC TTGGGACACC TATGCGCTGG CGCGCGGCAC CGCCAATGCG GTGGTCAAGC GCGGCAAGAA AAAGTGGGCG ATCCTGCAGG CCGATTTCGC CTACGGCCAC CAGCTCGCCA ATGACAGCCG CCGCTTCGTC GAGGCGGCCG GCGGCAAGGT GGTGTCGGAC ATCAAGCACC CGATCAACAC CAGCGACTTC TCGTCCTTCC TGCTGCAGGC GCAGAGCTCG GGCGCGGACG TGATCGCGCT CGCCAATGGC GGCGCCGACA CCATCAACGC CATCAAGTCG GCGGCCGAAT TCGGCATCGG CCGCGACGGC AAGCAGCAGG TGGTCGGCCT CGCCATCAAC CTCAACGACA CCCGCGCGCT CGGCCTCGCC AACGCGCAAG GGCTGCTGCT GACCGAGGCG TGGTACTGGG ACCTCAACGA CGAGACCCGC GCCTTCGCCA AGCGGTTCCA GGAGAAGTTC GGCAAGATGC CGACCTCGAC CCAGGCCGGC GACTACTCCT CGACCATGCA TTACCTGAAA GCGGTCGCCG CCGCCGGCAC GCTGGATGCG CAGACCGTGA TGGCCAAGAT GCGCGAGATG CCGATCGACG ATTTCTTCGC CAAGGGCGGC AAGATCCGGA TCGACGGCCG CATGGTGCAC GACATGTATC TGGCCGAAGT GAAGAAGCCG GCGGACTCCA AGGGGCCGTG GGACTTCTAC ACCATCCTCG AAACCATCCC CGGCGACCAG GCCTTCCGCC CGCTGTCGGA AAGCGCCTGC CCGCTGGTGA AGAAGTAA
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Protein sequence | MAIYRTNATR RLAALALCAG LGISGLGIGA ATAQQADNSP VRIGVLTDMS GLFADISGPG AVTAVKMAVD DFGGKVLGRP IEVLSADHQN KADVGVSLAR EWIDEKNVAM LADLMNSSVA LGVMELTKAK DRIAIVNGAS TSVITNEKCT PNSIHYTWDT YALARGTANA VVKRGKKKWA ILQADFAYGH QLANDSRRFV EAAGGKVVSD IKHPINTSDF SSFLLQAQSS GADVIALANG GADTINAIKS AAEFGIGRDG KQQVVGLAIN LNDTRALGLA NAQGLLLTEA WYWDLNDETR AFAKRFQEKF GKMPTSTQAG DYSSTMHYLK AVAAAGTLDA QTVMAKMREM PIDDFFAKGG KIRIDGRMVH DMYLAEVKKP ADSKGPWDFY TILETIPGDQ AFRPLSESAC PLVKK
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