Gene RPB_1149 details

Gene Information

• Locus tag: RPB_1149
• ID: 3909237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris HaA2
• Kingdom: Bacteria
• Replicon accession: NC_007778
• Strand: +
• Start bp: 1321476
• End bp: 1321886
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637883043
• Product: phenylacetic acid degradation-related protein
• Protein accession: YP_484770
• Protein GI: 86748274
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.648616
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGAGC CGCTGGCGCC CGCGCAGATC GAGGCGATGC TGCAGGCCTC GCCGTTCATT 
TCGTTTCTCG GCCTGACGGT GAGTTCGCTC GACGCCGCCA ATCAGGAGAT CGTGATGCGA 
TCGCCGATGC GCCCGGAATT CGAGCGCGAG CCCGGCACCA AGCAGTGGCA CGGCGGCCCG 
ATCGCCTCGA TCATCGACAC TGTCGGCGAC TACGCGCTGG TGATGTTCGT CGGCCGCGGC 
TTGCCCACGA TCAATTTTCG CGTCGATTAT TTCCGCCCCG CGATCGACAC CGCGCTGATC 
TCGACCGGCC GGGTGCGCCG GCTCGGCCGC ACCGTCGGCG TCGCCGATGT CGACGTCCAC 
GACGAGAAGG GCGCGCTGAT CGCGATCGGG CGCGCGACCT ATGCGATCTG A 

 

Protein sequence

MSEPLAPAQI EAMLQASPFI SFLGLTVSSL DAANQEIVMR SPMRPEFERE PGTKQWHGGP 
IASIIDTVGD YALVMFVGRG LPTINFRVDY FRPAIDTALI STGRVRRLGR TVGVADVDVH 
DEKGALIAIG RATYAI