| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1140 |
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| Symbol | |
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| ID | 3909228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1310770 |
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| End bp | 1311738 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637883034 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_484761 |
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| Protein GI | 86748265 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0567003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAAAGA CGTTGCCTGC GCCGGCCTCG CGCCCGTCCC GGGTCGGCTT CCTGCTGATC
GACGGCTTCG CGCTGATGTC GTTCGCTTCT GCCGTCGAGC CGCTGCGCGC CGCCAACGCC
ATCGCCGGGC GCACGCTGTA TCAATGGTTT CACGTCTCGA TCGACGGCCG TCCGATCGGC
GCCTCCAGCG GGCTGTCGAT CCAGCCGGAC TGCGCGATCG ACGGCGCGCA GGAGTTCGAC
ATCGTGCTGG TCTGTGCCGG CGGCAATCCG ACCAAATTCT CCGATCGGCG GACGATGAGC
TGGCTGCGCG CGCAGGCGCG GCGCGGCGTG GCGATCGGCG GCATCTCCGG CGGTCCTTAT
CTTCTCGCCC GCGCCAAGGT GCTCGACGGC TATCGCTGCA CGATCCATTG GGAGCACGCG
CCGGCCTTCG CCGAGGCGTT TCCGCATCTC GACCTGACGC GCAATTTGTT CGAGATCGAC
CGCGAGCGCC TGACCTGCGG CGGCGGCGTC GCCGGGCTCG ACATGATGCA GGCGCTGATC
CGCCGCGACC ACGGCCCGGA GCTGGCCGCC AAGGTCAGCG ACTGGTTTCT GCAGACCAAT
GTCCGGCTCG GCGATTCCAG CCAGCGGCCG AATGCGCGCG AGCGCGGGCG GCTCGGTCAT
CCCGCGCTGC AGGCCGCGAT CGAGCTGATG GAGCGCCGGC TGCGCGAGCC GGCGAGCCGG
ACCGAGATCG CCCGCGCCGC CGGCGTCTCG CTGCGCCAGC TCGAGCGATT ATTCACGACG
CATCTCAAGA CGACGATCGA GCGACGCTAC CTGATGATCC GGCTGCAGCG CGCGCGGACT
CTGCTGCGGC AGACGTCGCT CCCCGTCACC CAGATCGGCG CGGATTGCGG CTTCGTCAGC
CTCGCGCATT TCTCGCGCGT CTATAGGCAG CGCTTCGCGC GCACGCCCTC GGCCGACCGC
AGGCTCTGA
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| Protein sequence | MPKTLPAPAS RPSRVGFLLI DGFALMSFAS AVEPLRAANA IAGRTLYQWF HVSIDGRPIG
ASSGLSIQPD CAIDGAQEFD IVLVCAGGNP TKFSDRRTMS WLRAQARRGV AIGGISGGPY
LLARAKVLDG YRCTIHWEHA PAFAEAFPHL DLTRNLFEID RERLTCGGGV AGLDMMQALI
RRDHGPELAA KVSDWFLQTN VRLGDSSQRP NARERGRLGH PALQAAIELM ERRLREPASR
TEIARAAGVS LRQLERLFTT HLKTTIERRY LMIRLQRART LLRQTSLPVT QIGADCGFVS
LAHFSRVYRQ RFARTPSADR RL
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